RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 MFSD14AQ96MC6 490 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 SRPK1Q96SB4 655 aaKnown RBP8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 GLIS2Q9BZE0 524 aaPredicted RBP8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 CYP39A1Q9NYL5 469 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 ARMCX1Q9P291 453 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 PDP2Q9P2J9 529 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 KIAA1257Q9ULG3 409 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 LRCH1Q9Y2L9 728 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 C5P01031 1676 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 H0YGN5 161 aa8.52□□□□□ -1.04
PRKAB1-207ENST00000542698 MAGEB2O15479 319 aa8.52□□□□□ -1.04
PRKAB1-207ENST00000542698 ENO3P13929 434 aaPredicted RBP8.52□□□□□ -1.04
PRKAB1-207ENST00000542698 NCKAP1LP55160 1127 aa8.52□□□□□ -1.04
PRKAB1-207ENST00000542698 SLC34A1Q06495 639 aa8.52□□□□□ -1.04
PRKAB1-207ENST00000542698 BIRC2Q13490 618 aa8.52□□□□□ -1.04
PRKAB1-207ENST00000542698 BMPR2Q13873 1038 aa8.52□□□□□ -1.04
PRKAB1-207ENST00000542698 KBTBD12Q3ZCT8 623 aa8.52□□□□□ -1.04
PRKAB1-207ENST00000542698 PHF13Q86YI8 300 aaPredicted RBP8.52□□□□□ -1.04
PRKAB1-207ENST00000542698 ALLCQ8N6M5 410 aa8.52□□□□□ -1.04
PRKAB1-207ENST00000542698 DRC3Q9H069 523 aa8.52□□□□□ -1.04
PRKAB1-207ENST00000542698 GPATCH2LQ9NWQ4 482 aa8.52□□□□□ -1.04
PRKAB1-207ENST00000542698 NFS1Q9Y697 457 aa8.52□□□□□ -1.04
PRKAB1-207ENST00000542698 E2F8A0AVK6 867 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 APOC4-APOC2K7ER74 178 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 EDF1O60869 148 aaKnown RBP8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 ENTPD5O75356 428 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 APOC2P02655 101 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 MIPP30301 263 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 CDH8P55286 799 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 DPYSL3Q14195 570 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 PDK1Q15118 436 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 TRMT5Q32P41 509 aaKnown RBP8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 TDRD10Q5VZ19 366 aaKnown RBP8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 RSPH3Q86UC2 560 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 METTL23Q86XA0 190 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 CCDC60Q8IWA6 550 aaPredicted RBP8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 BRSK2Q8IWQ3 736 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 PDZD8Q8NEN9 1154 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 SCG3Q8WXD2 468 aaKnown RBP8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 OTUD5Q96G74 571 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 TMEM176AQ96HP8 235 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 NAT9Q9BTE0 207 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 FSD1LQ9BXM9 530 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 TRPV6Q9H1D0 765 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 TAGLN3Q9UI15 199 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 RPS6KL1Q9Y6S9 549 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 XIRP1Q702N8 1843 aaKnown RBP8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 SDR42E2A6NKP2 422 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 FOXO6A8MYZ6 492 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 PFDN6O15212 129 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 GLRA3O75311 464 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 KDELR1P24390 212 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 HOXD13P35453 343 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 DSG1Q02413 1049 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 ACCSLQ4AC99 568 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 DCAF12L1Q5VU92 463 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 NAIF1Q69YI7 327 aaPredicted RBP8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 CEP70Q8NHQ1 597 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 RNF139Q8WU17 664 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 FAM172AQ8WUF8 416 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 OXNAD1Q96HP4 312 aaPredicted RBP8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 APOPT1Q96IL0 206 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 MMP19Q99542 508 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 SIK2Q9H0K1 926 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 LRRC4CQ9HCJ2 640 aa8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 PAPOLBQ9NRJ5 636 aaKnown RBP8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 NOCTQ9UK39 431 aaKnown RBP8.52□□□□□ -1.05
PRKAB1-207ENST00000542698 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 A0A1W2PPM1 405 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 MTA2O94776 668 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 ITGAVP06756 1048 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 RPL22P35268 128 aaKnown RBP8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 RAP1GAPP47736 663 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 UGCGQ16739 394 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 GOLGA7BQ2TAP0 167 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 DCAF6Q58WW2 860 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 FKBP1CQ5VVH2 108 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 TWF2Q6IBS0 349 aaKnown RBP8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 RNF135Q8IUD6 432 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 CCNJLQ8IV13 435 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 CATSPER1Q8NEC5 780 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 ZNF398Q8TD17 642 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 TFB1MQ8WVM0 346 aaKnown RBP8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 ABTB1Q969K4 478 aaPredicted RBP8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 ZNF669Q96BR6 464 aaPredicted RBP8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 SDCCAG3Q96C92 435 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 ZBTB10Q96DT7 871 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 ANLNQ9NQW6 1124 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 DCDC2Q9UHG0 476 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 MCM8Q9UJA3 840 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 ARHGAP26Q9UNA1 814 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 DNAJC16Q9Y2G8 782 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 RNF103-CHMP3A0A140T963 221 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 CCDC78A2IDD5 438 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 CHRNB2P17787 502 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 CLCN3P51790 818 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 TPI1P60174 286 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 CDK16Q00536 496 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 CXCL9Q07325 125 aa8.51□□□□□ -1.05
PRKAB1-207ENST00000542698 USP10Q14694 798 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms