RNA–Protein interactions for RNA: ENST00000542264.1

ARAP1-215, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, human

TSL 3

Gene ARAP1, Length 271 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARAP1-215	ENST00000542264	MPL	P40238	635 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	EIF2D	P41214	584 aa	Known RBP	11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	ME1	P48163	572 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	SF3A2	Q15428	464 aa	Known RBP	11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	BMT2	Q1RMZ1	405 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	HSF5	Q4G112	596 aa	Predicted RBP	11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	PREPL	Q4J6C6	727 aa	Predicted RBP	11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	C2orf27A	Q580R0	203 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	STPG1	Q5TH74	334 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	NAIF1	Q69YI7	327 aa	Predicted RBP	11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	NUDT18	Q6ZVK8	323 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	NELFCD	Q8IXH7	590 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	B3GALNT2	Q8NCR0	500 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	TSTD1	Q8NFU3	115 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	USP33	Q8TEY7	942 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	OVCA2	Q8WZ82	227 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	ZNF516	Q92618	1163 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	TNIP3	Q96KP6	325 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	PNKP	Q96T60	521 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	BACH2	Q9BYV9	841 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	DUSP15	Q9H1R2	295 aa	Predicted RBP	11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	VRTN	Q9H8Y1	702 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	COMMD8	Q9NX08	183 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	NXF1	Q9UBU9	619 aa	Known RBP	11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	CPQ	Q9Y646	472 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	ATRX	P46100	2492 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	ATP8B3	O60423	1300 aa		11.32	□□□□□ -0.6
ARAP1-215	ENST00000542264	PKD1L2	Q7Z442	2459 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	LAMA1	P25391	3075 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	BCLAF3	A2AJT9	711 aa	Known RBP	11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	CAVIN2	O95810	425 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	OLFM2	O95897	454 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	ADH1C	P00326	375 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	OAS1	P00973	400 aa	Known RBP	11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	RPN1	P04843	607 aa	Known RBP	11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	GBP1	P32455	592 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	OPRD1	P41143	372 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	GRIA2	P42262	883 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	TNFRSF4	P43489	277 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	MYL6	P60660	151 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	ZXDB	P98169	803 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	CREB5	Q02930	508 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	EHHADH	Q08426	723 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	BYSL	Q13895	437 aa	Known RBP	11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	DHCR24	Q15392	516 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	CCDC6	Q16204	474 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	SGSM1	Q2NKQ1	1148 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	HECTD3	Q5T447	861 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	FILIP1	Q7Z7B0	1213 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	CEP57L1	Q8IYX8	460 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	KCNV2	Q8TDN2	545 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	TMEM174	Q8WUU8	243 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	EZH1	Q92800	747 aa	Predicted RBP	11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	SNX21	Q969T3	373 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	OTUB2	Q96DC9	234 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	CHAMP1	Q96JM3	812 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	LSM14B	Q9BX40	385 aa	Known RBP	11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	B3GNT5	Q9BYG0	378 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	XYLT2	Q9H1B5	865 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	SLC39A2	Q9NP94	309 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	SMPD4	Q9NXE4	827 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	CFAP97	Q9P2B7	532 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	MMP17	Q9ULZ9	603 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	COL4A2	P08572	1712 aa		11.31	□□□□□ -0.6
ARAP1-215	ENST00000542264	KHNYN	O15037	678 aa	Known RBP	11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	APOD	P05090	189 aa		11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	HSP90AA1	P07900	732 aa	Known RBP	11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	SLFN14	P0C7P3	912 aa		11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	ZSCAN22	P10073	491 aa	Predicted RBP	11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	MBL2	P11226	248 aa	Predicted RBP	11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	TRIM21	P19474	475 aa	Known RBP	11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	CLDN10	P78369	228 aa		11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	BIRC3	Q13489	604 aa		11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	NCOA4	Q13772	614 aa		11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	CRY1	Q16526	586 aa		11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	ZNF667	Q5HYK9	610 aa		11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	SNX30	Q5VWJ9	437 aa		11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	BTBD8	Q5XKL5	378 aa		11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	RNF43	Q68DV7	783 aa		11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	RHBDF2	Q6PJF5	856 aa		11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	RASSF3	Q86WH2	238 aa		11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	SLC9A9	Q8IVB4	645 aa		11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	PARD3B	Q8TEW8	1205 aa		11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	CNOT6L	Q96LI5	555 aa	Known RBP	11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	DUSP9	Q99956	384 aa	Known RBP	11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	MED10	Q9BTT4	135 aa		11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	ZNF518B	Q9C0D4	1074 aa		11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	BLZF1	Q9H2G9	400 aa		11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	DPEP3	Q9H4B8	488 aa		11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	PCDHA7	Q9UN72	937 aa		11.3	□□□□□ -0.6
ARAP1-215	ENST00000542264	CLDN5	O00501	218 aa		11.29	□□□□□ -0.6
ARAP1-215	ENST00000542264	IKBKB	O14920	756 aa		11.29	□□□□□ -0.6
ARAP1-215	ENST00000542264	DCLK1	O15075	740 aa		11.29	□□□□□ -0.6
ARAP1-215	ENST00000542264	MAP3K13	O43283	966 aa		11.29	□□□□□ -0.6
ARAP1-215	ENST00000542264	KAT7	O95251	611 aa		11.29	□□□□□ -0.6
ARAP1-215	ENST00000542264	CYP17A1	P05093	508 aa		11.29	□□□□□ -0.6
ARAP1-215	ENST00000542264	KCNA4	P22459	653 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms