RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 LCE1AQ5T7P2 110 aa4.4□□□□□ -1.71
LEMD3-204ENST00000542032 PRAMEF17Q5VTA0 474 aa4.4□□□□□ -1.71
LEMD3-204ENST00000542032 SLC9A4Q6AI14 798 aa4.4□□□□□ -1.71
LEMD3-204ENST00000542032 ZDHHC24Q6UX98 284 aa4.4□□□□□ -1.71
LEMD3-204ENST00000542032 CHST15Q7LFX5 561 aaPredicted RBP4.4□□□□□ -1.71
LEMD3-204ENST00000542032 OR56A3Q8NH54 315 aa4.4□□□□□ -1.71
LEMD3-204ENST00000542032 ZNF778Q96MU6 729 aa4.4□□□□□ -1.71
LEMD3-204ENST00000542032 TRIM5Q9C035 493 aa4.4□□□□□ -1.71
LEMD3-204ENST00000542032 A1CFQ9NQ94 594 aaKnown RBP4.4□□□□□ -1.71
LEMD3-204ENST00000542032 TRMT13Q9NUP7 481 aaKnown RBP4.4□□□□□ -1.71
LEMD3-204ENST00000542032 DNMT3BQ9UBC3 853 aaKnown RBP4.4□□□□□ -1.71
LEMD3-204ENST00000542032 NOB1Q9ULX3 412 aaKnown RBP4.4□□□□□ -1.71
LEMD3-204ENST00000542032 PRRT4C9JH25 899 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 CCP110O43303 1012 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 PRC1O43663 620 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 PRKCBP05771 671 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 DLDP09622 509 aaKnown RBP4.39□□□□□ -1.71
LEMD3-204ENST00000542032 SLC7A1P30825 629 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 PDE1AP54750 535 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 SUMO3P55854 103 aaPredicted RBP4.39□□□□□ -1.71
LEMD3-204ENST00000542032 EZH2Q15910 746 aaKnown RBP4.39□□□□□ -1.71
LEMD3-204ENST00000542032 PTCHD3Q3KNS1 767 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 TBC1D25Q3MII6 688 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 CERCAMQ5T4B2 595 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 CYB5RLQ6IPT4 315 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 ZNF425Q6IV72 752 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 KIRREL2Q6UWL6 708 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 NAPRTQ6XQN6 538 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 TRIM72Q6ZMU5 477 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 CATSPERGQ6ZRH7 1159 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 NEK8Q86SG6 692 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 CAND1Q86VP6 1230 aaKnown RBP4.39□□□□□ -1.71
LEMD3-204ENST00000542032 CHSY1Q86X52 802 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 ABHD11Q8NFV4 315 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 CYP2W1Q8TAV3 490 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 XAGE5Q8WWM1 108 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 RAPGEF4Q8WZA2 1011 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 PPP2R3CQ969Q6 453 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 CTHRC1Q96CG8 243 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 SLC39A13Q96H72 371 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 C8orf48Q96LL4 319 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 SNX18Q96RF0 628 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 CPNE7Q9UBL6 633 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 BTBD3Q9Y2F9 522 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 CDY1Q9Y6F8 540 aa4.39□□□□□ -1.71
LEMD3-204ENST00000542032 SETD1BQ9UPS6 1966 aaKnown RBP4.39□□□□□ -1.71
LEMD3-204ENST00000542032 WDR91A4D1P6 747 aa4.38□□□□□ -1.71
LEMD3-204ENST00000542032 PPP6CO00743 305 aa4.38□□□□□ -1.71
LEMD3-204ENST00000542032 TSPAN6O43657 245 aa4.38□□□□□ -1.71
LEMD3-204ENST00000542032 VNN1O95497 513 aa4.38□□□□□ -1.71
LEMD3-204ENST00000542032 TUBB4AP04350 444 aa4.38□□□□□ -1.71
LEMD3-204ENST00000542032 PRR35P0CG20 571 aa4.38□□□□□ -1.71
LEMD3-204ENST00000542032 BCAT1P54687 386 aa4.38□□□□□ -1.71
LEMD3-204ENST00000542032 TIAL1Q01085 375 aaKnown RBP eCLIP4.38□□□□□ -1.71
LEMD3-204ENST00000542032 CCNIQ14094 377 aa4.38□□□□□ -1.71
LEMD3-204ENST00000542032 MLC1Q15049 377 aa4.38□□□□□ -1.71
LEMD3-204ENST00000542032 RNASE12Q5GAN4 147 aaKnown RBP4.38□□□□□ -1.71
LEMD3-204ENST00000542032 WDR75Q8IWA0 830 aaKnown RBP4.38□□□□□ -1.71
LEMD3-204ENST00000542032 C8orf58Q8NAV2 365 aa4.38□□□□□ -1.71
LEMD3-204ENST00000542032 SCARB1Q8WTV0 552 aa4.38□□□□□ -1.71
LEMD3-204ENST00000542032 SMG7Q92540 1137 aaKnown RBP4.38□□□□□ -1.71
LEMD3-204ENST00000542032 SPSB4Q96A44 273 aa4.38□□□□□ -1.71
LEMD3-204ENST00000542032 RITA1Q96K30 269 aa4.38□□□□□ -1.71
LEMD3-204ENST00000542032 PRR25Q96S07 402 aa4.38□□□□□ -1.71
LEMD3-204ENST00000542032 C17orf80Q9BSJ5 609 aa4.38□□□□□ -1.71
LEMD3-204ENST00000542032 GBA2Q9HCG7 927 aaPredicted RBP4.38□□□□□ -1.71
LEMD3-204ENST00000542032 ZSCAN32Q9NX65 697 aa4.38□□□□□ -1.71
LEMD3-204ENST00000542032 COL20A1Q9P218 1284 aa4.38□□□□□ -1.71
LEMD3-204ENST00000542032 RNF7Q9UBF6 113 aa4.38□□□□□ -1.71
LEMD3-204ENST00000542032 DDX20Q9UHI6 824 aaKnown RBP4.38□□□□□ -1.71
LEMD3-204ENST00000542032 KAT6AQ92794 2004 aa4.38□□□□□ -1.71
LEMD3-204ENST00000542032 TCRBV5S1A1TA0A578 114 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 PYCARD-AS1I3L0S3 204 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 M0R3H8 397 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 PDE8BO95263 885 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 ZBED1O96006 694 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 MYCLP12524 364 aaPredicted RBP4.37□□□□□ -1.71
LEMD3-204ENST00000542032 MYF5P13349 255 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 KLRC1P26715 233 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 EPHB2P29323 1055 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 ZNF81P51508 661 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 CACNB3P54284 484 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 PRKAG1P54619 331 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 E2F1Q01094 437 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 FMO1Q01740 532 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 GBX1Q14549 363 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 NPY5RQ15761 445 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 CNGA2Q16280 664 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 GPR162Q16538 588 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 SRSF7Q16629 238 aaKnown RBP eCLIP4.37□□□□□ -1.71
LEMD3-204ENST00000542032 MTX3Q5HYI7 312 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 CEP78Q5JTW2 689 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 ZNF626Q68DY1 528 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 FCRL6Q6DN72 434 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 C11orf87Q6NUJ2 197 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 SRGAP1Q7Z6B7 1085 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 MPP5Q8N3R9 675 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 TERB1Q8NA31 727 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 TMEM171Q8WVE6 324 aa4.37□□□□□ -1.71
LEMD3-204ENST00000542032 DAZAP1Q96EP5 407 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms