RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 ROPN1Q9HAT0 212 aaPredicted RBP15.71■□□□□ 0.1
VARS2-211ENST00000541562 SNTG2Q9NY99 539 aa15.71■□□□□ 0.1
VARS2-211ENST00000541562 PTK7Q13308 1070 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 STAT4Q14765 748 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 TRMT10BQ6PF06 316 aaKnown RBP15.7■□□□□ 0.1
VARS2-211ENST00000541562 PDIK1LQ8N165 341 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 PNPLA1Q8N8W4 532 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 CCNYQ8ND76 341 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 XYLT2Q9H1B5 865 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 CDHR5Q9HBB8 845 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 PCMTD2Q9NV79 361 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 FAM237BA0A1B0GVD1 139 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 CREB3O43889 395 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 PRPSAP2O60256 369 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 LPXNO60711 386 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 INHBAP08476 426 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 KDSRQ06136 332 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 GOLGA7BQ2TAP0 167 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 PPP1R26Q5T8A7 1209 aaPredicted RBP15.7■□□□□ 0.1
VARS2-211ENST00000541562 CDHR3Q6ZTQ4 885 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 SLC4A11Q8NBS3 891 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 ZNF75CPQ92670 426 aaPredicted RBP15.7■□□□□ 0.1
VARS2-211ENST00000541562 VTI1AQ96AJ9 217 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 NCAPGQ9BPX3 1015 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 MRPL45Q9BRJ2 306 aaKnown RBP15.7■□□□□ 0.1
VARS2-211ENST00000541562 HTTP42858 3142 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 EME2A4GXA9 379 aaPredicted RBP15.7■□□□□ 0.1
VARS2-211ENST00000541562 MAFGO15525 162 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 ARF4P18085 180 aaPredicted RBP15.7■□□□□ 0.1
VARS2-211ENST00000541562 ATXN3P54252 364 aaPredicted RBP15.7■□□□□ 0.1
VARS2-211ENST00000541562 NME3Q13232 169 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 CLUL1Q15846 466 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 PMF1Q6P1K2 205 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 APBB1IPQ7Z5R6 666 aaPredicted RBP15.7■□□□□ 0.1
VARS2-211ENST00000541562 HEY2Q9UBP5 337 aa15.7■□□□□ 0.1
VARS2-211ENST00000541562 TRIM49D1C9J1S8 452 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 MAPK13O15264 365 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 MAFO75444 373 aaPredicted RBP15.69■□□□□ 0.1
VARS2-211ENST00000541562 CYP3A5P20815 502 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 ARL4CP56559 192 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 PITX1P78337 314 aaPredicted RBP15.69■□□□□ 0.1
VARS2-211ENST00000541562 GBE1Q04446 702 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 PEX6Q13608 980 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 NEDD9Q14511 834 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 LRRC36Q1X8D7 754 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 MPZL3Q6UWV2 235 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 SUGP1Q8IWZ8 645 aaKnown RBP15.69■□□□□ 0.1
VARS2-211ENST00000541562 MTMR14Q8NCE2 650 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 DCPSQ96C86 337 aaKnown RBP15.69■□□□□ 0.1
VARS2-211ENST00000541562 CXorf56Q9H5V9 222 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 UBP1Q9NZI7 540 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 CPSF3Q9UKF6 684 aaKnown RBP15.69■□□□□ 0.1
VARS2-211ENST00000541562 CLDN5O00501 218 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 ZNF280AP59817 542 aaPredicted RBP15.69■□□□□ 0.1
VARS2-211ENST00000541562 METTL7BQ6UX53 244 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 LBX2Q6XYB7 198 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 POLNQ7Z5Q5 900 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 ALYREFQ86V81 257 aaKnown RBP15.69■□□□□ 0.1
VARS2-211ENST00000541562 XYLT1Q86Y38 959 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 NME8Q8N427 588 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 FAM172AQ8WUF8 416 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 CLPTM1LQ96KA5 538 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 CYTH2Q99418 400 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 OSMRQ99650 979 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 SYNPO2Q9UMS6 1093 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 SERPINB3P29508 390 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 GBP1P32455 592 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 XRCC4Q13426 336 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 WDR49Q8IV35 697 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 GPRC5DQ9NZD1 345 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 RNF181Q9P0P0 153 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 TUBGCP4Q9UGJ1 667 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 ZFP69BQ9UJL9 534 aa15.69■□□□□ 0.1
VARS2-211ENST00000541562 ADGRA2Q96PE1 1338 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 ZBED1O96006 694 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 MXRA7P84157 204 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 ZNF200P98182 395 aaPredicted RBP15.68■□□□□ 0.1
VARS2-211ENST00000541562 MFSD5Q6N075 450 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 EP400NLQ6ZTU2 488 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 NLRP9Q7RTR0 991 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 ZNF677Q86XU0 584 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 KHSRPQ92945 711 aaKnown RBP eCLIP15.68■□□□□ 0.1
VARS2-211ENST00000541562 MAGEB18Q96M61 343 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 RILPQ96NA2 401 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 TRIM6Q9C030 488 aaPredicted RBP15.68■□□□□ 0.1
VARS2-211ENST00000541562 RABGEF1Q9UJ41 708 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 ZBTB42B2RXF5 422 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 C19orf81C9J6K1 198 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 BCAR1P56945 870 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 ROR1Q01973 937 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 MAP3K10Q02779 954 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 NR1H3Q13133 447 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 DPYSL3Q14195 570 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 OASLQ15646 514 aaKnown RBP15.68■□□□□ 0.1
VARS2-211ENST00000541562 FAM219BQ5XKK7 198 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 DENND5BQ6ZUT9 1274 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 SHKBP1Q8TBC3 707 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 CENPTQ96BT3 561 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 ETNK2Q9NVF9 386 aa15.68■□□□□ 0.1
VARS2-211ENST00000541562 SLC12A4Q9UP95 1085 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms