RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 C17orf102A2RUQ5 167 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 WDR91A4D1P6 747 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 HAS3O00219 553 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 CYP1A2P05177 515 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 MAPTP10636 758 aaKnown RBP15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 ALADP13716 330 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 BRDTQ58F21 947 aaPredicted RBP15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 ZC3H18Q86VM9 953 aaKnown RBP15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 MCPH1Q8NEM0 835 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 STRA6Q9BX79 667 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 MAF1Q9H063 256 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 SAYSD1Q9NPB0 183 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 MYO7AQ13402 2215 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 TTC4O95801 387 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 GBP1P32455 592 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 P3H1Q32P28 736 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 SYCP2LQ5T4T6 812 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 RFWD3Q6PCD5 774 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 CENPTQ96BT3 561 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 PAWRQ96IZ0 340 aaKnown RBP15□□□□□ -0.01
SFSWAP-210ENST00000541286 NINJ2Q9NZG7 142 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 NAALADL1Q9UQQ1 740 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 NOD1Q9Y239 953 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 IGKV6-21A0A0C4DH24 114 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 AHCYL1O43865 530 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 MNX1P50219 401 aaPredicted RBP15□□□□□ -0.01
SFSWAP-210ENST00000541286 TAS2R40P59535 323 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 CLEC16AQ2KHT3 1053 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 FAM13CQ8NE31 585 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 PITPNM3Q9BZ71 974 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 ARL2BPQ9Y2Y0 163 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 P4HA2O15460 535 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 GALNTL6Q49A17 601 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 CGB2Q6NT52 195 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 VSTM1Q6UX27 236 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 TRMT10CQ7L0Y3 403 aaKnown RBP15□□□□□ -0.01
SFSWAP-210ENST00000541286 MCOLN2Q8IZK6 566 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 SCLYQ96I15 445 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 FAM167AQ96KS9 214 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 GLT1D1Q96MS3 346 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 RBM15Q96T37 977 aaKnown RBP eCLIP15□□□□□ -0.011e-7■■■■□ 22
SFSWAP-210ENST00000541286 UBE2OQ9C0C9 1292 aaKnown RBP15□□□□□ -0.01
SFSWAP-210ENST00000541286 MCOLN1Q9GZU1 580 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 TMEM165Q9HC07 324 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 PAK6Q9NQU5 681 aaPredicted RBP15□□□□□ -0.01
SFSWAP-210ENST00000541286 LMCD1Q9NZU5 365 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 GTF2IRD1Q9UHL9 959 aa15□□□□□ -0.01
SFSWAP-210ENST00000541286 EXOC1LA0A1B0GW35 172 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 TLR3O15455 904 aaKnown RBP14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 RNF8O76064 485 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 LUC7L3O95232 432 aaKnown RBP14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 PYGBP11216 843 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 ITIH2P19823 946 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 AFF1P51825 1210 aaKnown RBP14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 ADAM17P78536 824 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 TMCO2Q7Z6W1 182 aaPredicted RBP14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 GLIS1Q8NBF1 620 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 DNAJC9Q8WXX5 260 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 ZNF333Q96JL9 665 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 DCLK3Q9C098 648 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 LRRC19Q9H756 370 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 AGO3Q9H9G7 860 aaKnown RBP14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 ARHGAP28Q9P2N2 729 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 PEX11AO75192 247 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 BANF1O75531 89 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 TCF4P15884 667 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 SP100P23497 879 aaPredicted RBP14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 GPC3P51654 580 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 NCKAP1LP55160 1127 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 CCL23P55773 120 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 KLC1Q07866 573 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 CYP24A1Q07973 514 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 ALCAMQ13740 583 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 ZC3H12AQ5D1E8 599 aaKnown RBP14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 ATL2Q8NHH9 583 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 CCDC77Q9BR77 488 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 OSBPL8Q9BZF1 889 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 MROH7Q68CQ1 1323 aa14.99□□□□□ -0.01
SFSWAP-210ENST00000541286 FSCN2O14926 492 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 DKC1O60832 514 aaKnown RBP eCLIP14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 CHRNA1P02708 482 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 TPBGLP0DKB5 382 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 CALB2P22676 271 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 FOXB2Q5VYV0 432 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 CROCCP2Q86T23 111 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 USP37Q86T82 979 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 ANKMY2Q8IV38 441 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 RXFP1Q9HBX9 757 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 NRCAMQ92823 1304 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 HLA-DRAP01903 254 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 IGFBP6P24592 240 aaPredicted RBP14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 SERPINB4P48594 390 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 HADHBP55084 474 aaKnown RBP14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 KHDC1Q4VXA5 237 aaKnown RBP14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 GPD1LQ8N335 351 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 KCTD17Q8N5Z5 321 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 EIF2AQ9BY44 585 aaKnown RBP14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 UPF3AQ9H1J1 476 aaKnown RBP14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 RNPEPL1Q9HAU8 725 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 ALG13Q9NP73 1137 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms