RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 RFX1P22670 979 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 WEE1P30291 646 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 PPP3CCP48454 512 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 APBA1Q02410 837 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 GCNT1Q02742 428 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 EXOC3L4Q17RC7 722 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 VWA3BQ502W6 1294 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 SLC44A4Q53GD3 710 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 SGO2Q562F6 1265 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 TCP11X2Q5H9J9 407 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 MIIPQ5JXC2 388 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 IER5LQ5T953 404 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 ARHGAP17Q68EM7 881 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 PHLDB3Q6NSJ2 640 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 GJB7Q6PEY0 223 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 TRIM65Q6PJ69 517 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 CLEC20AQ6ZU45 233 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 GPRIN1Q7Z2K8 1008 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 MFSD6LQ8IWD5 586 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 FBXL6Q8N531 539 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 CELF5Q8N6W0 485 aaKnown RBP9.76□□□□□ -0.85
SNHG1-215ENST00000540904 UBR7Q8N806 425 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 USP13Q92995 863 aaPredicted RBP9.76□□□□□ -0.85
SNHG1-215ENST00000540904 ZFYVE19Q96K21 471 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 KREMEN1Q96MU8 473 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 LRRC3BQ96PB8 259 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 SLC22A12Q96S37 553 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 DUSP16Q9BY84 665 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 NDST4Q9H3R1 872 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 CHORDC1Q9UHD1 332 aaPredicted RBP9.76□□□□□ -0.85
SNHG1-215ENST00000540904 CCL26Q9Y258 94 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 GTPBP10A4D1E9 387 aaKnown RBP9.75□□□□□ -0.85
SNHG1-215ENST00000540904 SOBPA7XYQ1 873 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 HHLA1C9JL84 531 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 RNF225M0QZC1 329 aaPredicted RBP9.75□□□□□ -0.85
SNHG1-215ENST00000540904 CALCAP01258 141 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 PAEPP09466 180 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 USP17L7P0C7H9 530 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 VDRP11473 427 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 KRT5P13647 590 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 HDCP19113 662 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 EEF1GP26641 437 aaKnown RBP9.75□□□□□ -0.85
SNHG1-215ENST00000540904 PON1P27169 355 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 MFAP3P55082 362 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 SLC8A3P57103 927 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 MYL5Q02045 173 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 FCHO2Q0JRZ9 810 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 MLF2Q15773 248 aaPredicted RBP9.75□□□□□ -0.85
SNHG1-215ENST00000540904 GOLGA7BQ2TAP0 167 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 KLHL40Q2TBA0 621 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 MAMSTRQ6ZN01 415 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 ANKRD52Q8NB46 1076 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 RBBP8NLQ8NC74 664 aaPredicted RBP9.75□□□□□ -0.85
SNHG1-215ENST00000540904 PDZD8Q8NEN9 1154 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 BPIFB1Q8TDL5 484 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 IRF7Q92985 503 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 FBXO44Q9H4M3 255 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 PNPLA8Q9NP80 782 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 HEBP1Q9NRV9 189 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 FANCLQ9NW38 375 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 THG1LQ9NWX6 298 aaKnown RBP9.75□□□□□ -0.85
SNHG1-215ENST00000540904 OBP2AQ9NY56 170 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 TAB2Q9NYJ8 693 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 IL37Q9NZH6 218 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 GMIPQ9P107 970 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 HESX1Q9UBX0 185 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 APEX2Q9UBZ4 518 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 TSPAN16Q9UKR8 245 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 KIAA1257Q9ULG3 409 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 MYO10Q9HD67 2058 aa9.75□□□□□ -0.85
SNHG1-215ENST00000540904 TECTAO75443 2155 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 O00370 1275 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 CHADO15335 359 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 CYP26A1O43174 497 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 TPM2P07951 284 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 COL9A1P20849 921 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 BRD2P25440 801 aaKnown RBP9.74□□□□□ -0.85
SNHG1-215ENST00000540904 USP8P40818 1118 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 PGFP49763 221 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 PDE6CP51160 858 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 BCAT1P54687 386 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 VCPP55072 806 aaKnown RBP9.74□□□□□ -0.85
SNHG1-215ENST00000540904 KRT31Q15323 416 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 ARHGAP44Q17R89 818 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 ANO6Q4KMQ2 910 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 CDKAL1Q5VV42 579 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 CWF19L1Q69YN2 538 aaKnown RBP9.74□□□□□ -0.85
SNHG1-215ENST00000540904 TPRG1Q6ZUI0 275 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 ENOSF1Q7L5Y1 443 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 TTC30AQ86WT1 665 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 AOPEPQ8N6M6 819 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 TTC8Q8TAM2 541 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 RIN3Q8TB24 985 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 UBA3Q8TBC4 463 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 SH3RF2Q8TEC5 729 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 OVCA2Q8WZ82 227 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 TFAP2BQ92481 460 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 DNASE1L2Q92874 299 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 SHDQ96IW2 340 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 NAT10Q9H0A0 1025 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms