RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 INVSQ9Y283 1065 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 PCDHGA5Q9Y5G8 931 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 CPQQ9Y646 472 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 HELZP42694 1942 aaKnown RBP17.31■□□□□ 0.36
TRIM65-203ENST00000540812 POLR2DO15514 142 aaKnown RBP17.3■□□□□ 0.36
TRIM65-203ENST00000540812 CUTAO60888 179 aa17.3■□□□□ 0.36
TRIM65-203ENST00000540812 KRT37O76014 449 aa17.3■□□□□ 0.36
TRIM65-203ENST00000540812 YEATS4O95619 227 aa17.3■□□□□ 0.36
TRIM65-203ENST00000540812 ABL1P00519 1130 aa17.3■□□□□ 0.36
TRIM65-203ENST00000540812 OAS1P00973 400 aaKnown RBP17.3■□□□□ 0.36
TRIM65-203ENST00000540812 CYP17A1P05093 508 aa17.3■□□□□ 0.36
TRIM65-203ENST00000540812 CASP4P49662 377 aa17.3■□□□□ 0.36
TRIM65-203ENST00000540812 MYL6P60660 151 aa17.3■□□□□ 0.36
TRIM65-203ENST00000540812 TNNC1P63316 161 aa17.3■□□□□ 0.36
TRIM65-203ENST00000540812 TAF10Q12962 218 aa17.3■□□□□ 0.36
TRIM65-203ENST00000540812 FOXD4L6Q3SYB3 417 aaPredicted RBP17.3■□□□□ 0.36
TRIM65-203ENST00000540812 C2orf27AQ580R0 203 aa17.3■□□□□ 0.36
TRIM65-203ENST00000540812 STPG1Q5TH74 334 aa17.3■□□□□ 0.36
TRIM65-203ENST00000540812 FOXD4L3Q6VB84 417 aaPredicted RBP17.3■□□□□ 0.36
TRIM65-203ENST00000540812 SFTPA1Q8IWL2 248 aa17.3■□□□□ 0.36
TRIM65-203ENST00000540812 PLEKHO2Q8TD55 490 aa17.3■□□□□ 0.36
TRIM65-203ENST00000540812 ZNF396Q96N95 335 aaPredicted RBP17.3■□□□□ 0.36
TRIM65-203ENST00000540812 SLC39A2Q9NP94 309 aa17.3■□□□□ 0.36
TRIM65-203ENST00000540812 NXF1Q9UBU9 619 aaKnown RBP17.3■□□□□ 0.36
TRIM65-203ENST00000540812 ABCA7Q8IZY2 2146 aa17.29■□□□□ 0.36
TRIM65-203ENST00000540812 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.29■□□□□ 0.36
TRIM65-203ENST00000540812 OLFM2O95897 454 aa17.29■□□□□ 0.36
TRIM65-203ENST00000540812 FAM163BP0C2L3 166 aa17.29■□□□□ 0.36
TRIM65-203ENST00000540812 SLC6A11P48066 632 aa17.29■□□□□ 0.36
TRIM65-203ENST00000540812 DGKEP52429 567 aa17.29■□□□□ 0.36
TRIM65-203ENST00000540812 SNRPFP62306 86 aaKnown RBP17.29■□□□□ 0.36
TRIM65-203ENST00000540812 MESP2Q0VG99 397 aa17.29■□□□□ 0.36
TRIM65-203ENST00000540812 IFRD2Q12894 506 aaPredicted RBP17.29■□□□□ 0.36
TRIM65-203ENST00000540812 TRPC3Q13507 836 aa17.29■□□□□ 0.36
TRIM65-203ENST00000540812 BMT2Q1RMZ1 405 aa17.29■□□□□ 0.36
TRIM65-203ENST00000540812 TDRD10Q5VZ19 366 aaKnown RBP17.29■□□□□ 0.36
TRIM65-203ENST00000540812 CCDC33Q8N5R6 958 aa17.29■□□□□ 0.36
TRIM65-203ENST00000540812 B3GALNT2Q8NCR0 500 aa17.29■□□□□ 0.36
TRIM65-203ENST00000540812 TSTD1Q8NFU3 115 aa17.29■□□□□ 0.36
TRIM65-203ENST00000540812 ELMO3Q96BJ8 720 aa17.29■□□□□ 0.36
TRIM65-203ENST00000540812 TPSD1Q9BZJ3 242 aa17.29■□□□□ 0.36
TRIM65-203ENST00000540812 ELOVL4Q9GZR5 314 aa17.29■□□□□ 0.36
TRIM65-203ENST00000540812 SMYD3Q9H7B4 428 aa17.29■□□□□ 0.36
TRIM65-203ENST00000540812 EHD2Q9NZN4 543 aa17.29■□□□□ 0.36
TRIM65-203ENST00000540812 CFAP97Q9P2B7 532 aa17.29■□□□□ 0.36
TRIM65-203ENST00000540812 A8MXQ7 604 aa17.28■□□□□ 0.36
TRIM65-203ENST00000540812 STAU1O95793 577 aaKnown RBP17.28■□□□□ 0.36
TRIM65-203ENST00000540812 HNRNPLP14866 589 aaKnown RBP eCLIP17.28■□□□□ 0.36
TRIM65-203ENST00000540812 PPP3CCP48454 512 aa17.28■□□□□ 0.36
TRIM65-203ENST00000540812 CDH8P55286 799 aa17.28■□□□□ 0.36
TRIM65-203ENST00000540812 CREB5Q02930 508 aa17.28■□□□□ 0.36
TRIM65-203ENST00000540812 CUL4BQ13620 913 aa17.28■□□□□ 0.36
TRIM65-203ENST00000540812 DHCR24Q15392 516 aa17.28■□□□□ 0.36
TRIM65-203ENST00000540812 ELF2Q15723 593 aa17.28■□□□□ 0.36
TRIM65-203ENST00000540812 C12orf40Q86WS4 652 aa17.28■□□□□ 0.36
TRIM65-203ENST00000540812 C12orf56Q8IXR9 622 aa17.28■□□□□ 0.36
TRIM65-203ENST00000540812 GRAMD1CQ8IYS0 662 aa17.28■□□□□ 0.36
TRIM65-203ENST00000540812 ADGRG2Q8IZP9 1017 aa17.28■□□□□ 0.36
TRIM65-203ENST00000540812 DDX1Q92499 740 aaKnown RBP17.28■□□□□ 0.36
TRIM65-203ENST00000540812 VPS45Q9NRW7 570 aa17.28■□□□□ 0.36
TRIM65-203ENST00000540812 RHOBTB1O94844 696 aa17.27■□□□□ 0.36
TRIM65-203ENST00000540812 MBL2P11226 248 aaPredicted RBP17.27■□□□□ 0.36
TRIM65-203ENST00000540812 CHRM1P11229 460 aaPredicted RBP17.27■□□□□ 0.36
TRIM65-203ENST00000540812 AFMP43652 599 aa17.27■□□□□ 0.36
TRIM65-203ENST00000540812 N4BP2L1Q5TBK1 243 aaPredicted RBP17.27■□□□□ 0.36
TRIM65-203ENST00000540812 ANO7Q6IWH7 933 aa17.27■□□□□ 0.36
TRIM65-203ENST00000540812 HSCBQ8IWL3 235 aa17.27■□□□□ 0.36
TRIM65-203ENST00000540812 NUP93Q8N1F7 819 aa17.27■□□□□ 0.36
TRIM65-203ENST00000540812 KIAA1958Q8N8K9 716 aa17.27■□□□□ 0.36
TRIM65-203ENST00000540812 SLITRK1Q96PX8 696 aa17.27■□□□□ 0.36
TRIM65-203ENST00000540812 SDCBP2Q9H190 292 aa17.27■□□□□ 0.36
TRIM65-203ENST00000540812 MAGEF1Q9HAY2 307 aa17.27■□□□□ 0.36
TRIM65-203ENST00000540812 MMP17Q9ULZ9 603 aa17.27■□□□□ 0.36
TRIM65-203ENST00000540812 USP24Q9UPU5 2620 aa17.27■□□□□ 0.35
TRIM65-203ENST00000540812 CEP295Q9C0D2 2601 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 MYOFQ9NZM1 2061 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 BCLAF3A2AJT9 711 aaKnown RBP17.26■□□□□ 0.35
TRIM65-203ENST00000540812 EXOC3O60645 756 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 PHACTR2O75167 634 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 CAVIN2O95810 425 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 BCKDHBP21953 392 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 YWHAQP27348 245 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 ATICP31939 592 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 GBP1P32455 592 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 KNOP1Q1ED39 458 aaKnown RBP17.26■□□□□ 0.35
TRIM65-203ENST00000540812 RNF43Q68DV7 783 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 RHBDF2Q6PJF5 856 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 TMEM92Q6UXU6 159 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 SCARA5Q6ZMJ2 495 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 PAQR9Q6ZVX9 377 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 RASSF3Q86WH2 238 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 MDGA1Q8NFP4 955 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 CCDC26Q8TAB7 109 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 SCAMP5Q8TAC9 235 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 FBXO32Q969P5 355 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 SYAP1Q96A49 352 aaPredicted RBP17.26■□□□□ 0.35
TRIM65-203ENST00000540812 ZFRQ96KR1 1074 aaKnown RBP17.26■□□□□ 0.35
TRIM65-203ENST00000540812 CNOT6LQ96LI5 555 aaKnown RBP17.26■□□□□ 0.35
TRIM65-203ENST00000540812 KCNK16Q96T55 309 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 VRTNQ9H8Y1 702 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms