RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 ZNF618Q5T7W0 954 aa17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 ZNF449Q6P9G9 518 aa17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 USP50Q70EL3 339 aaPredicted RBP17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 ZCCHC9Q8N567 271 aaKnown RBP17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 ADAM32Q8TC27 787 aa17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 CCHCR1Q8TD31 782 aa17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 ATXN2LQ8WWM7 1075 aaKnown RBP17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 TTC17Q96AE7 1141 aa17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 RNF39Q9H2S5 420 aa17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 PTPRHQ9HD43 1115 aa17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 WDR35Q9P2L0 1181 aa17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 KCNH4Q9UQ05 1017 aa17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 RBBP6Q7Z6E9 1792 aaKnown RBP17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 CAPN9O14815 690 aa17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 SNAI1O95863 264 aaPredicted RBP17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 INHBAP08476 426 aa17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 C6orf222P0C671 652 aaPredicted RBP17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 PHBP35232 272 aa17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 FNBP1LQ5T0N5 605 aa17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 ZMAT2Q96NC0 199 aaKnown RBP17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 ASB7Q9H672 318 aa17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 TP73O15350 636 aa17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 GPD2P43304 727 aa17.85■□□□□ 0.45
EPB41L3-204ENST00000540638 E2F8A0AVK6 867 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 FAM47DPA6NHR8 397 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 TFE3P19532 575 aaPredicted RBP17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 LMO2P25791 158 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 RHBDF2Q6PJF5 856 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 VSTM1Q6UX27 236 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 C2orf69Q8N8R5 385 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 TTC13Q8NBP0 860 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 SLC13A1Q9BZW2 595 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 CCT8L1PA6NM43 557 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 CLDN5O00501 218 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 KLRC2P26717 231 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 RBL1P28749 1068 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 CA9Q16790 459 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 MSS51Q4VC12 460 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 DCAF6Q58WW2 860 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 PLEKHH3Q7Z736 793 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 PPTC7Q8NI37 304 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 PEBP4Q96S96 227 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 TRIM56Q9BRZ2 755 aaKnown RBP17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 C16orf70Q9BSU1 422 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 CNPY3Q9BT09 278 aa17.84■□□□□ 0.45
EPB41L3-204ENST00000540638 HNRNPH1P31943 449 aaKnown RBP17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 GNL1P36915 607 aaPredicted RBP17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 ELK3P41970 407 aa17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 SCTRP47872 440 aa17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 PPIL6Q8IXY8 311 aa17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 NPLOC4Q8TAT6 608 aa17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 SLC2A14Q8TDB8 520 aa17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 ZFP42Q96MM3 310 aa17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 PCDH9Q9HC56 1237 aa17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 BHMG1C9JSJ3 638 aaPredicted RBP17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 TREHO43280 583 aa17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 UBOX5O94941 541 aa17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 TRUB2O95900 331 aaKnown RBP17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 MMP3P08254 477 aa17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 PAEPP09466 180 aa17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 RPA3P35244 121 aaPredicted RBP17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 HUNKP57058 714 aa17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 ZNF268Q14587 947 aaPredicted RBP17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 TRPM8Q7Z2W7 1104 aa17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 SPATA21Q7Z572 469 aa17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 ATP11CQ8NB49 1132 aa17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 AP5M1Q9H0R1 490 aa17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 GBA2Q9HCG7 927 aaPredicted RBP17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 VTA1Q9NP79 307 aa17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 PCDHGC3Q9UN70 934 aa17.83■□□□□ 0.45
EPB41L3-204ENST00000540638 PSME4Q14997 1843 aa17.83■□□□□ 0.44
EPB41L3-204ENST00000540638 CCDC78A2IDD5 438 aa17.83■□□□□ 0.44
EPB41L3-204ENST00000540638 HUS1O60921 280 aa17.83■□□□□ 0.44
EPB41L3-204ENST00000540638 MT-ND3P03897 115 aa17.83■□□□□ 0.44
EPB41L3-204ENST00000540638 ZBTB16Q05516 673 aa17.83■□□□□ 0.44
EPB41L3-204ENST00000540638 CCL14Q16627 93 aa17.83■□□□□ 0.44
EPB41L3-204ENST00000540638 LVRNQ6Q4G3 990 aa17.83■□□□□ 0.44
EPB41L3-204ENST00000540638 HASPINQ8TF76 798 aa17.83■□□□□ 0.44
EPB41L3-204ENST00000540638 MAML3Q96JK9 1138 aa17.83■□□□□ 0.44
EPB41L3-204ENST00000540638 RSAD1Q9HA92 442 aa17.83■□□□□ 0.44
EPB41L3-204ENST00000540638 SLC40A1Q9NP59 571 aa17.83■□□□□ 0.44
EPB41L3-204ENST00000540638 CNTN6Q9UQ52 1028 aa17.83■□□□□ 0.44
EPB41L3-204ENST00000540638 INPP5FQ9Y2H2 1132 aa17.83■□□□□ 0.44
EPB41L3-204ENST00000540638 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.83■□□□□ 0.44
EPB41L3-204ENST00000540638 LOXHD1Q8IVV2 1947 aa17.83■□□□□ 0.44
EPB41L3-204ENST00000540638 GTF2A2P52657 109 aa17.82■□□□□ 0.44
EPB41L3-204ENST00000540638 SLC25A11Q02978 314 aaKnown RBP17.82■□□□□ 0.44
EPB41L3-204ENST00000540638 TFDP2Q14188 446 aa17.82■□□□□ 0.44
EPB41L3-204ENST00000540638 MORF4L2Q15014 288 aa17.82■□□□□ 0.44
EPB41L3-204ENST00000540638 TAF1CQ15572 869 aaPredicted RBP17.82■□□□□ 0.44
EPB41L3-204ENST00000540638 ANKRD20A8PQ5CZ79 823 aa17.82■□□□□ 0.44
EPB41L3-204ENST00000540638 NOTUMQ6P988 496 aa17.82■□□□□ 0.44
EPB41L3-204ENST00000540638 CPT1BQ92523 772 aa17.82■□□□□ 0.44
EPB41L3-204ENST00000540638 ABHD16BQ9H3Z7 469 aa17.82■□□□□ 0.44
EPB41L3-204ENST00000540638 LRRC4Q9HBW1 653 aa17.82■□□□□ 0.44
EPB41L3-204ENST00000540638 CD248Q9HCU0 757 aa17.82■□□□□ 0.44
EPB41L3-204ENST00000540638 USP15Q9Y4E8 981 aaPredicted RBP17.82■□□□□ 0.44
EPB41L3-204ENST00000540638 APOL1O14791 398 aa17.82■□□□□ 0.44
EPB41L3-204ENST00000540638 TMEM63AO94886 807 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms