RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 MRPL4Q9BYD3 311 aaKnown RBP12.84□□□□□ -0.35
NPC1-202ENST00000540608 MMADHCQ9H3L0 296 aaPredicted RBP12.84□□□□□ -0.35
NPC1-202ENST00000540608 ACAD9Q9H845 621 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 AS3MTQ9HBK9 375 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 PICK1Q9NRD5 415 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 WDR35Q9P2L0 1181 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 TJP2Q9UDY2 1190 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 POLIQ9UNA4 740 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 TEX264Q9Y6I9 313 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 DPPA5A6NC42 116 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 KLF11O14901 512 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 PPP1R12AO14974 1030 aaPredicted RBP12.83□□□□□ -0.36
NPC1-202ENST00000540608 NVLO15381 856 aaKnown RBP12.83□□□□□ -0.36
NPC1-202ENST00000540608 MED7O43513 233 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 MSCO60682 206 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 SPAG6O75602 509 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 INHBAP08476 426 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 PYGBP11216 843 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 BGNP21810 368 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 MUM1Q2TAK8 710 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 ZNF699Q32M78 642 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 WDR78Q5VTH9 848 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 FAM91A1Q658Y4 838 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 RINLQ6ZS11 566 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 VPS52Q8N1B4 723 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 TTC17Q96AE7 1141 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 TEX13BQ9BXU2 312 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 XYLT2Q9H1B5 865 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 FBXO6Q9NRD1 293 aaPredicted RBP12.83□□□□□ -0.36
NPC1-202ENST00000540608 NRBP2Q9NSY0 501 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 TAS2R1Q9NYW7 299 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 PCSK1NQ9UHG2 260 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 ZNF112Q9UJU3 913 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 OGTO15294 1046 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 ITGBL1O95965 494 aaPredicted RBP12.83□□□□□ -0.36
NPC1-202ENST00000540608 ESRRAP11474 423 aaPredicted RBP12.83□□□□□ -0.36
NPC1-202ENST00000540608 NEFHP12036 1026 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 EFNA5P52803 228 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 KLC1Q07866 573 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 LBRQ14739 615 aaKnown RBP12.83□□□□□ -0.36
NPC1-202ENST00000540608 KPNB1Q14974 876 aaKnown RBP12.83□□□□□ -0.36
NPC1-202ENST00000540608 ACAP1Q15027 740 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 CCDC6Q16204 474 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 ACSBG2Q5FVE4 666 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 SCARA5Q6ZMJ2 495 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 APLFQ8IW19 511 aaPredicted RBP12.83□□□□□ -0.36
NPC1-202ENST00000540608 SPATA18Q8TC71 538 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 SYNCQ9H7C4 482 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 PNPLA8Q9NP80 782 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 NMRK1Q9NWW6 199 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 CPSF3Q9UKF6 684 aaKnown RBP12.83□□□□□ -0.36
NPC1-202ENST00000540608 GJA3Q9Y6H8 435 aa12.83□□□□□ -0.36
NPC1-202ENST00000540608 LCTP09848 1927 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 EIF4E1BA6NMX2 242 aaKnown RBP12.82□□□□□ -0.36
NPC1-202ENST00000540608 KBTBD13C9JR72 458 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 PEX10O60683 326 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 FAM155BO75949 473 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 TRUB2O95900 331 aaKnown RBP12.82□□□□□ -0.36
NPC1-202ENST00000540608 CD19P15391 556 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 RPS12P25398 132 aaKnown RBP12.82□□□□□ -0.36
NPC1-202ENST00000540608 MIPP30301 263 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 SERPINB4P48594 390 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 TFAMQ00059 246 aaKnown RBP12.82□□□□□ -0.36
NPC1-202ENST00000540608 RCN1Q15293 331 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 STXBP2Q15833 593 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 DCAF15Q66K64 600 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 CCDC62Q6P9F0 684 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 CATSPERGQ6ZRH7 1159 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 XYLT1Q86Y38 959 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 EMC1Q8N766 993 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 PRPF31Q8WWY3 499 aaKnown RBP12.82□□□□□ -0.36
NPC1-202ENST00000540608 MCUR1Q96AQ8 359 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 PRR11Q96HE9 360 aaPredicted RBP12.82□□□□□ -0.36
NPC1-202ENST00000540608 OXNAD1Q96HP4 312 aaPredicted RBP12.82□□□□□ -0.36
NPC1-202ENST00000540608 C12orf42Q96LP6 360 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 ACO2Q99798 780 aaKnown RBP12.82□□□□□ -0.36
NPC1-202ENST00000540608 RSAD1Q9HA92 442 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 PDHA1P08559 390 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 MYL2P10916 166 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 YWHAGP61981 247 aaKnown RBP eCLIP12.82□□□□□ -0.36
NPC1-202ENST00000540608 OCRLQ01968 901 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 ROR1Q01973 937 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 CNTN2Q02246 1040 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 SLC34A1Q06495 639 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 KCNJ11Q14654 390 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 TAF5Q15542 800 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 TTC39BQ5VTQ0 682 aaPredicted RBP12.82□□□□□ -0.36
NPC1-202ENST00000540608 SNX30Q5VWJ9 437 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 NAIF1Q69YI7 327 aaPredicted RBP12.82□□□□□ -0.36
NPC1-202ENST00000540608 DARS2Q6PI48 645 aaKnown RBP12.82□□□□□ -0.36
NPC1-202ENST00000540608 HSPH1Q92598 858 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 FAM136AQ96C01 138 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 CPXM1Q96SM3 734 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 MAF1Q9H063 256 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 METTL5Q9NRN9 209 aaKnown RBP12.82□□□□□ -0.36
NPC1-202ENST00000540608 USP18Q9UMW8 372 aa12.82□□□□□ -0.36
NPC1-202ENST00000540608 FCHO1O14526 889 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 CHADO15335 359 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 MAFO75444 373 aaPredicted RBP12.81□□□□□ -0.36
NPC1-202ENST00000540608 RNF8O76064 485 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms