RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 DLL3Q9NYJ7 618 aa13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 CLDN5O00501 218 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 HRO43593 1189 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 ATG13O75143 517 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 ZNF202O95125 648 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 RTN3O95197 1032 aaPredicted RBP13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 LAMA1P25391 3075 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 DMWDQ09019 674 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 GRSF1Q12849 480 aaKnown RBP eCLIP13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 TAF10Q12962 218 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 BIRC3Q13489 604 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 FBXO43Q4G163 708 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 ZCWPW2Q504Y3 356 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 WDR5BQ86VZ2 330 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 UNC93AQ86WB7 457 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 KIAA2013Q8IYS2 634 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 FUKQ8N0W3 1084 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 CPA6Q8N4T0 437 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 ATP2A3Q93084 1043 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 TNIP3Q96KP6 325 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 GOLPH3LQ9H4A5 285 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 CSNK1G1Q9HCP0 422 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 TRPC7Q9HCX4 862 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 FRMD4BQ9Y2L6 1034 aa13.94□□□□□ -0.18
SEMA4D-223ENST00000540475 LRP3O75074 770 aa13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 AKAP3O75969 853 aa13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 EGFP01133 1207 aa13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 ZDHHC11BP0C7U3 371 aa13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 P4HA1P13674 534 aa13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 ASPAP45381 313 aa13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 INCA1Q0VD86 236 aa13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 GAB4Q2WGN9 574 aa13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 LAIR1Q6GTX8 287 aa13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 PKN3Q6P5Z2 889 aa13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 INTS8Q75QN2 995 aaKnown RBP13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 ADGRG2Q8IZP9 1017 aa13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 EZH1Q92800 747 aaPredicted RBP13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 SECISBP2LQ93073 1101 aaKnown RBP13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 CCDC47Q96A33 483 aaKnown RBP13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 EXOC4Q96A65 974 aa13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 RMDN1Q96DB5 314 aa13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 FAXDC2Q96IV6 333 aa13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 SLITRK1Q96PX8 696 aa13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 KCNK16Q96T55 309 aa13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 P2RY13Q9BPV8 354 aa13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 LINC00597Q9H2U6 94 aa13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 WNT6Q9Y6F9 365 aa13.93□□□□□ -0.18
SEMA4D-223ENST00000540475 LEFTY2O00292 366 aa13.92□□□□□ -0.18
SEMA4D-223ENST00000540475 NR2F2P24468 414 aa13.92□□□□□ -0.18
SEMA4D-223ENST00000540475 YWHAQP27348 245 aa13.92□□□□□ -0.18
SEMA4D-223ENST00000540475 RAP1GAPP47736 663 aa13.92□□□□□ -0.18
SEMA4D-223ENST00000540475 IFNAR2P48551 515 aa13.92□□□□□ -0.18
SEMA4D-223ENST00000540475 FNTBP49356 437 aa13.92□□□□□ -0.18
SEMA4D-223ENST00000540475 TUBP50607 506 aa13.92□□□□□ -0.18
SEMA4D-223ENST00000540475 VAMP7P51809 220 aa13.92□□□□□ -0.18
SEMA4D-223ENST00000540475 NR1H3Q13133 447 aa13.92□□□□□ -0.18
SEMA4D-223ENST00000540475 EDRF1Q3B7T1 1238 aa13.92□□□□□ -0.18
SEMA4D-223ENST00000540475 COBLL1Q53SF7 1204 aa13.92□□□□□ -0.18
SEMA4D-223ENST00000540475 CEP135Q66GS9 1140 aa13.92□□□□□ -0.18
SEMA4D-223ENST00000540475 FAM35AQ86V20 835 aa13.92□□□□□ -0.18
SEMA4D-223ENST00000540475 CAMKK1Q8N5S9 505 aa13.92□□□□□ -0.18
SEMA4D-223ENST00000540475 PDZD8Q8NEN9 1154 aa13.92□□□□□ -0.18
SEMA4D-223ENST00000540475 ZMIZ2Q8NF64 920 aa13.92□□□□□ -0.18
SEMA4D-223ENST00000540475 CD101Q93033 1021 aa13.92□□□□□ -0.18
SEMA4D-223ENST00000540475 SMARCD1Q96GM5 515 aa13.92□□□□□ -0.18
SEMA4D-223ENST00000540475 NCDNQ9UBB6 729 aa13.92□□□□□ -0.18
SEMA4D-223ENST00000540475 ATP8B3O60423 1300 aa13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 A0A0A0MRY4 1105 aa13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 RNF40O75150 1001 aa13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 NFATC1O95644 943 aa13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 HLA-DRAP01903 254 aa13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 RETP07949 1114 aa13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 RPL13P26373 211 aaKnown RBP13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 GTF2H1P32780 548 aa13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 PSMC2P35998 433 aaKnown RBP13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 NDST1P52848 882 aa13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 PPP3CAQ08209 521 aa13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 PUM1Q14671 1186 aaKnown RBP eCLIP13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 NAIF1Q69YI7 327 aaPredicted RBP13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 SYT13Q7L8C5 426 aa13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 ACOT1Q86TX2 421 aa13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 FMR1NBQ8N0W7 255 aaPredicted RBP13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 SPATA20Q8TB22 786 aa13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 ELMO3Q96BJ8 720 aa13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 ZFRQ96KR1 1074 aaKnown RBP13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 SMOQ99835 787 aa13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 HINFPQ9BQA5 517 aa13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 CYP3A43Q9HB55 503 aa13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 PARD6AQ9NPB6 346 aa13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 DMAP1Q9NPF5 467 aaPredicted RBP13.91□□□□□ -0.18
SEMA4D-223ENST00000540475 E2F8A0AVK6 867 aa13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 SLC9A3R1O14745 358 aaPredicted RBP13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 BEST1O76090 585 aa13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 SDHBP21912 280 aa13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 HOXC13P31276 330 aa13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 OPRD1P41143 372 aa13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 ADAM9Q13443 819 aa13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 SIM2Q14190 667 aaPredicted RBP13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 SPOPLQ6IQ16 392 aa13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 DDX42Q86XP3 938 aaKnown RBP eCLIP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms