RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 CPQQ9Y646 472 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 C1QTNF9BB2RNN3 333 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 F8VP50 259 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 TNFRSF10BO14763 440 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 ZBTB24O43167 697 aaPredicted RBP13.3□□□□□ -0.28
COPS7A-211ENST00000540408 KAT7O95251 611 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 KLF8O95600 359 aaPredicted RBP13.3□□□□□ -0.28
COPS7A-211ENST00000540408 C1QTNF9P0C862 333 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 MBL2P11226 248 aaPredicted RBP13.3□□□□□ -0.28
COPS7A-211ENST00000540408 TNNI1P19237 187 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 BCKDHBP21953 392 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 RDXP35241 583 aaKnown RBP13.3□□□□□ -0.28
COPS7A-211ENST00000540408 GRIA2P42262 883 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 TNFRSF4P43489 277 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 TNNC1P63316 161 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 ZXDBP98169 803 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 TAF10Q12962 218 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 TRIM61Q5EBN2 209 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 MDH1BQ5I0G3 518 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 BTBD8Q5XKL5 378 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 TRMT11Q7Z4G4 463 aaKnown RBP13.3□□□□□ -0.28
COPS7A-211ENST00000540408 SYT12Q8IV01 421 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 ALLCQ8N6M5 410 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 PDZD8Q8NEN9 1154 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 FAM84AQ96KN4 292 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 ELOVL4Q9GZR5 314 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 ARHGEF4Q9NR80 690 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 CFAP97Q9P2B7 532 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 CHD8Q9HCK8 2581 aa13.3□□□□□ -0.28
COPS7A-211ENST00000540408 A0A0A0MRY4 1105 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 TMEM8BA6NDV4 472 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 PATE3B3GLJ2 98 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 CDX4O14627 284 aaPredicted RBP13.29□□□□□ -0.28
COPS7A-211ENST00000540408 TACC1O75410 805 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 RTN3O95197 1032 aaPredicted RBP13.29□□□□□ -0.28
COPS7A-211ENST00000540408 OLFM2O95897 454 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 DLATP10515 647 aaKnown RBP13.29□□□□□ -0.28
COPS7A-211ENST00000540408 ADH5P11766 374 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 PTPN1P18031 435 aaKnown RBP13.29□□□□□ -0.28
COPS7A-211ENST00000540408 YWHAQP27348 245 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 P2RY2P41231 377 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 SLC6A11P48066 632 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 ATXN3P54252 364 aaPredicted RBP13.29□□□□□ -0.28
COPS7A-211ENST00000540408 AMPD3Q01432 767 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 GAD2Q05329 585 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 IFRD2Q12894 506 aaPredicted RBP13.29□□□□□ -0.28
COPS7A-211ENST00000540408 TRPC3Q13507 836 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 RHBDF2Q6PJF5 856 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 TMEM92Q6UXU6 159 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 TRAPPC11Q7Z392 1133 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 CBWD2Q8IUF1 395 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 NUP93Q8N1F7 819 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 IL17RCQ8NAC3 791 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 KDF1Q8NAX2 398 aaPredicted RBP13.29□□□□□ -0.28
COPS7A-211ENST00000540408 RDH13Q8NBN7 331 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 OLIG1Q8TAK6 271 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 KCNV2Q8TDN2 545 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 RLN3Q8WXF3 142 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 OTUB2Q96DC9 234 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 ADAM33Q9BZ11 813 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 HSPBP1Q9NZL4 362 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 ZMIZ1Q9ULJ6 1067 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 SH3BP1Q9Y3L3 701 aa13.29□□□□□ -0.28
COPS7A-211ENST00000540408 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 E2F8A0AVK6 867 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 TBC1D3BA6NDS4 549 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 A8MXQ7 604 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 SGK1O00141 431 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 OAS1P00973 400 aaKnown RBP13.28□□□□□ -0.28
COPS7A-211ENST00000540408 SNRNP35Q16560 246 aaKnown RBP13.28□□□□□ -0.28
COPS7A-211ENST00000540408 GAB4Q2WGN9 574 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 WDR72Q3MJ13 1102 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 LYSMD4Q5XG99 296 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 ARMCX6Q7L4S7 300 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 TMEFF1Q8IYR6 380 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 PDILTQ8N807 584 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 DEFB124Q8NES8 71 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 CEP76Q8TAP6 659 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 HMGB4Q8WW32 186 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 OVCA2Q8WZ82 227 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 MRPL45Q9BRJ2 306 aaKnown RBP13.28□□□□□ -0.28
COPS7A-211ENST00000540408 FGFBP2Q9BYJ0 223 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 TNMDQ9H2S6 317 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 THADAQ6YHU6 1953 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 ATP8B3O60423 1300 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 PTPRJQ12913 1337 aa13.28□□□□□ -0.28
COPS7A-211ENST00000540408 ANAPC1Q9H1A4 1944 aa13.27□□□□□ -0.28
COPS7A-211ENST00000540408 TCRBV21S2A2A0A5A6 115 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 EIF3DO15371 548 aaKnown RBP eCLIP13.27□□□□□ -0.29
COPS7A-211ENST00000540408 AP5Z1O43299 807 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 CLSTN1O94985 981 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 CST3P01034 146 aaPredicted RBP13.27□□□□□ -0.29
COPS7A-211ENST00000540408 HOXD12P35452 270 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 MAPK8P45983 427 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 KDSRQ06136 332 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 SLC39A14Q15043 492 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 LY6G5CQ5SRR4 150 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 HECTD3Q5T447 861 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 EMC10Q5UCC4 262 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 SDE2Q6IQ49 451 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms