RNA–Protein interactions for RNA: ENST00000540162.5

MRPL48-209, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 5

Gene MRPL48, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-209ENST00000540162 R3HCC1Q9Y3T6 440 aaKnown RBP12.36□□□□□ -0.43
MRPL48-209ENST00000540162 NEUROG3Q9Y4Z2 214 aa12.36□□□□□ -0.43
MRPL48-209ENST00000540162 PCDHB13Q9Y5F0 798 aa12.36□□□□□ -0.43
MRPL48-209ENST00000540162 TSC2P49815 1807 aa12.36□□□□□ -0.43
MRPL48-209ENST00000540162 AKAP13Q12802 2813 aa12.36□□□□□ -0.43
MRPL48-209ENST00000540162 ATXN2Q99700 1313 aaKnown RBP12.36□□□□□ -0.43
MRPL48-209ENST00000540162 TCRBV21S2A2A0A5A6 115 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 SLC9A3R1O14745 358 aaPredicted RBP12.35□□□□□ -0.43
MRPL48-209ENST00000540162 ADAM23O75077 832 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 BMP15O95972 392 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 CFIP05156 583 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 GAP43P17677 238 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 ANXA13P27216 316 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 GRIA2P42262 883 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 TNFRSF4P43489 277 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 PPP3CCP48454 512 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 ATXN3P54252 364 aaPredicted RBP12.35□□□□□ -0.43
MRPL48-209ENST00000540162 KDSRQ06136 332 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 RESTQ13127 1097 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 BYSLQ13895 437 aaKnown RBP12.35□□□□□ -0.43
MRPL48-209ENST00000540162 MAPRE1Q15691 268 aaKnown RBP12.35□□□□□ -0.43
MRPL48-209ENST00000540162 LYSMD4Q5XG99 296 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 LARP1BQ659C4 914 aaKnown RBP12.35□□□□□ -0.43
MRPL48-209ENST00000540162 SV2BQ7L1I2 683 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 MYCBPAPQ8TBZ2 947 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 PCED1BQ96HM7 432 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 ANKRD36BP1Q96IX9 119 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 CEP295NLQ96MC4 621 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 MMS19Q96T76 1030 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 TTLL2Q9BWV7 592 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 GTPBP2Q9BX10 602 aaKnown RBP12.35□□□□□ -0.43
MRPL48-209ENST00000540162 FGFBP2Q9BYJ0 223 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 INTS13Q9NVM9 706 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 CCDC39Q9UFE4 941 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 SLC6A14Q9UN76 642 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 LHX6Q9UPM6 363 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 MSRB2Q9Y3D2 182 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 PTPRJQ12913 1337 aa12.35□□□□□ -0.43
MRPL48-209ENST00000540162 F8VP50 259 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 TRIM66O15016 1216 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 PRPF6O94906 941 aaKnown RBP12.34□□□□□ -0.43
MRPL48-209ENST00000540162 ADH1CP00326 375 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 ADH5P11766 374 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 IDEP14735 1019 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 WARSP23381 471 aaKnown RBP12.34□□□□□ -0.43
MRPL48-209ENST00000540162 GNL1P36915 607 aaPredicted RBP12.34□□□□□ -0.43
MRPL48-209ENST00000540162 EIF2DP41214 584 aaKnown RBP12.34□□□□□ -0.43
MRPL48-209ENST00000540162 FAM193AP78312 1265 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 NOP14P78316 857 aaKnown RBP12.34□□□□□ -0.43
MRPL48-209ENST00000540162 TAF10Q12962 218 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 ACAP1Q15027 740 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 HSF5Q4G112 596 aaPredicted RBP12.34□□□□□ -0.43
MRPL48-209ENST00000540162 MDH1BQ5I0G3 518 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 SPDYCQ5MJ68 293 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 LY6G5CQ5SRR4 150 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 TDRD10Q5VZ19 366 aaKnown RBP12.34□□□□□ -0.43
MRPL48-209ENST00000540162 RRAGBQ5VZM2 374 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 HS2ST1Q7LGA3 356 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 GPD1LQ8N335 351 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 HDDC3Q8N4P3 179 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 CHCHD4Q8N4Q1 142 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 KIAA1958Q8N8K9 716 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 NAT16Q8N8M0 369 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 C8orf48Q96LL4 319 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 MRPL45Q9BRJ2 306 aaKnown RBP12.34□□□□□ -0.43
MRPL48-209ENST00000540162 EHD2Q9NZN4 543 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 STK17AQ9UEE5 414 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 NME7Q9Y5B8 376 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 CLIC4Q9Y696 253 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 ATRXP46100 2492 aa12.34□□□□□ -0.43
MRPL48-209ENST00000540162 SCN1AP35498 2009 aa12.33□□□□□ -0.43
MRPL48-209ENST00000540162 TBC1D3BA6NDS4 549 aa12.33□□□□□ -0.44
MRPL48-209ENST00000540162 ZNF233A6NK53 670 aa12.33□□□□□ -0.44
MRPL48-209ENST00000540162 UPK3BL1B0FP48 263 aa12.33□□□□□ -0.44
MRPL48-209ENST00000540162 UPK3BL2E5RIL1 263 aa12.33□□□□□ -0.44
MRPL48-209ENST00000540162 OLFM2O95897 454 aa12.33□□□□□ -0.44
MRPL48-209ENST00000540162 OAS1P00973 400 aaKnown RBP12.33□□□□□ -0.44
MRPL48-209ENST00000540162 CST3P01034 146 aaPredicted RBP12.33□□□□□ -0.44
MRPL48-209ENST00000540162 TNNC2P02585 160 aa12.33□□□□□ -0.44
MRPL48-209ENST00000540162 MBL2P11226 248 aaPredicted RBP12.33□□□□□ -0.44
MRPL48-209ENST00000540162 DPP6P42658 865 aa12.33□□□□□ -0.44
MRPL48-209ENST00000540162 CACNA2D1P54289 1103 aa12.33□□□□□ -0.44
MRPL48-209ENST00000540162 RPL6Q02878 288 aaKnown RBP12.33□□□□□ -0.44
MRPL48-209ENST00000540162 GFPT1Q06210 699 aaPredicted RBP12.33□□□□□ -0.44
MRPL48-209ENST00000540162 IFRD2Q12894 506 aaPredicted RBP12.33□□□□□ -0.44
MRPL48-209ENST00000540162 DUOXA1Q1HG43 343 aa12.33□□□□□ -0.44
MRPL48-209ENST00000540162 DUOXA2Q1HG44 320 aa12.33□□□□□ -0.44
MRPL48-209ENST00000540162 PHTF2Q8N3S3 785 aa12.33□□□□□ -0.44
MRPL48-209ENST00000540162 PANK2Q9BZ23 570 aa12.33□□□□□ -0.44
MRPL48-209ENST00000540162 SNX25Q9H3E2 840 aa12.33□□□□□ -0.44
MRPL48-209ENST00000540162 OLFML3Q9NRN5 406 aa12.33□□□□□ -0.44
MRPL48-209ENST00000540162 PANK4Q9NVE7 773 aa12.33□□□□□ -0.44
MRPL48-209ENST00000540162 CHORDC1Q9UHD1 332 aaPredicted RBP12.33□□□□□ -0.44
MRPL48-209ENST00000540162 SMC3Q9UQE7 1217 aa12.33□□□□□ -0.44
MRPL48-209ENST00000540162 IGF2RP11717 2491 aa12.33□□□□□ -0.44
MRPL48-209ENST00000540162 BAHCC1Q9P281 2608 aa12.33□□□□□ -0.44
MRPL48-209ENST00000540162 E2F8A0AVK6 867 aa12.32□□□□□ -0.44
MRPL48-209ENST00000540162 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.32□□□□□ -0.44
MRPL48-209ENST00000540162 TAF4O00268 1085 aa12.32□□□□□ -0.44
MRPL48-209ENST00000540162 CLDN5O00501 218 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms