RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 CPA6Q8N4T0 437 aa20.25■□□□□ 0.83
TNFRSF1A-212ENST00000539372 TAS1R2Q8TE23 839 aa20.25■□□□□ 0.83
TNFRSF1A-212ENST00000539372 RUBCNQ92622 972 aa20.25■□□□□ 0.83
TNFRSF1A-212ENST00000539372 TAF4BQ92750 862 aa20.25■□□□□ 0.83
TNFRSF1A-212ENST00000539372 SLITRK1Q96PX8 696 aa20.25■□□□□ 0.83
TNFRSF1A-212ENST00000539372 RNF38Q9H0F5 515 aa20.25■□□□□ 0.83
TNFRSF1A-212ENST00000539372 LINC00597Q9H2U6 94 aa20.25■□□□□ 0.83
TNFRSF1A-212ENST00000539372 APOBEC3GQ9HC16 384 aaKnown RBP20.25■□□□□ 0.83
TNFRSF1A-212ENST00000539372 KRT82Q9NSB4 513 aa20.25■□□□□ 0.83
TNFRSF1A-212ENST00000539372 SMPD4Q9NXE4 827 aa20.25■□□□□ 0.83
TNFRSF1A-212ENST00000539372 SMG5Q9UPR3 1016 aaKnown RBP20.25■□□□□ 0.83
TNFRSF1A-212ENST00000539372 LEFTY2O00292 366 aa20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 TRDMT1O14717 391 aaKnown RBP20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 AP1G2O75843 785 aa20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 EGFP01133 1207 aa20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 YWHAQP27348 245 aa20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 HOXC13P31276 330 aa20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 GJA4P35212 333 aa20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 PPP3CCP48454 512 aa20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 EML3Q32P44 896 aa20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 HEATR6Q6AI08 1181 aaKnown RBP20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 PKN3Q6P5Z2 889 aa20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 FUKQ8N0W3 1084 aa20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 SYNPOQ8N3V7 929 aa20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 SCAMP5Q8TAC9 235 aa20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 ERCC4Q92889 916 aaPredicted RBP20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 ATP2A3Q93084 1043 aa20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 FBXO32Q969P5 355 aa20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 SMARCD1Q96GM5 515 aa20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 EPC1Q9H2F5 836 aa20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 FBRSL1Q9HCM7 1045 aaKnown RBP20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 FAM49BQ9NUQ9 324 aa20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 EP300Q09472 2414 aaPredicted RBP20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 GVINP1Q7Z2Y8 2422 aa20.24■□□□□ 0.83
TNFRSF1A-212ENST00000539372 CHURC1-FNTBB4DL54 471 aa20.23■□□□□ 0.83
TNFRSF1A-212ENST00000539372 K7ESF4 209 aa20.23■□□□□ 0.83
TNFRSF1A-212ENST00000539372 SCAMP3O14828 347 aaKnown RBP20.23■□□□□ 0.83
TNFRSF1A-212ENST00000539372 RTN3O95197 1032 aaPredicted RBP20.23■□□□□ 0.83
TNFRSF1A-212ENST00000539372 OAS1P00973 400 aaKnown RBP20.23■□□□□ 0.83
TNFRSF1A-212ENST00000539372 TCF3P15923 654 aa20.23■□□□□ 0.83
TNFRSF1A-212ENST00000539372 PFKLP17858 780 aa20.23■□□□□ 0.83
TNFRSF1A-212ENST00000539372 FNTBP49356 437 aa20.23■□□□□ 0.83
TNFRSF1A-212ENST00000539372 GALK1P51570 392 aa20.23■□□□□ 0.83
TNFRSF1A-212ENST00000539372 SLC5A3P53794 718 aa20.23■□□□□ 0.83
TNFRSF1A-212ENST00000539372 SLC7A9P82251 487 aa20.23■□□□□ 0.83
TNFRSF1A-212ENST00000539372 AMPD2Q01433 879 aa20.23■□□□□ 0.83
TNFRSF1A-212ENST00000539372 C12orf29Q8N999 325 aa20.23■□□□□ 0.83
TNFRSF1A-212ENST00000539372 SLC2A14Q8TDB8 520 aa20.23■□□□□ 0.83
TNFRSF1A-212ENST00000539372 P2RY13Q9BPV8 354 aa20.23■□□□□ 0.83
TNFRSF1A-212ENST00000539372 IMPG2Q9BZV3 1241 aa20.23■□□□□ 0.83
TNFRSF1A-212ENST00000539372 DMAP1Q9NPF5 467 aaPredicted RBP20.23■□□□□ 0.83
TNFRSF1A-212ENST00000539372 NCDNQ9UBB6 729 aa20.23■□□□□ 0.83
TNFRSF1A-212ENST00000539372 CPQQ9Y646 472 aa20.23■□□□□ 0.83
TNFRSF1A-212ENST00000539372 BEST1O76090 585 aa20.22■□□□□ 0.83
TNFRSF1A-212ENST00000539372 PRCPP42785 496 aa20.22■□□□□ 0.83
TNFRSF1A-212ENST00000539372 LPAL2Q16609 132 aa20.22■□□□□ 0.83
TNFRSF1A-212ENST00000539372 EDRF1Q3B7T1 1238 aa20.22■□□□□ 0.83
TNFRSF1A-212ENST00000539372 UNC93AQ86WB7 457 aa20.22■□□□□ 0.83
TNFRSF1A-212ENST00000539372 CRYBG2Q8N1P7 616 aa20.22■□□□□ 0.83
TNFRSF1A-212ENST00000539372 ENGASEQ8NFI3 743 aa20.22■□□□□ 0.83
TNFRSF1A-212ENST00000539372 TWNKQ96RR1 684 aa20.22■□□□□ 0.83
TNFRSF1A-212ENST00000539372 SMOQ99835 787 aa20.22■□□□□ 0.83
TNFRSF1A-212ENST00000539372 TMEM8AQ9HCN3 771 aa20.22■□□□□ 0.83
TNFRSF1A-212ENST00000539372 RMND1Q9NWS8 449 aa20.22■□□□□ 0.83
TNFRSF1A-212ENST00000539372 CHORDC1Q9UHD1 332 aaPredicted RBP20.22■□□□□ 0.83
TNFRSF1A-212ENST00000539372 GPR179Q6PRD1 2367 aa20.22■□□□□ 0.83
TNFRSF1A-212ENST00000539372 TNFRSF10BO14763 440 aa20.21■□□□□ 0.83
TNFRSF1A-212ENST00000539372 PAPSS2O95340 614 aaPredicted RBP20.21■□□□□ 0.83
TNFRSF1A-212ENST00000539372 OLFM2O95897 454 aa20.21■□□□□ 0.83
TNFRSF1A-212ENST00000539372 MBL2P11226 248 aaPredicted RBP20.21■□□□□ 0.83
TNFRSF1A-212ENST00000539372 CD58P19256 250 aa20.21■□□□□ 0.83
TNFRSF1A-212ENST00000539372 ADORA2BP29275 332 aa20.21■□□□□ 0.83
TNFRSF1A-212ENST00000539372 MAP3K7CLP57077 242 aa20.21■□□□□ 0.83
TNFRSF1A-212ENST00000539372 SRSF5Q13243 272 aaKnown RBP20.21■□□□□ 0.83
TNFRSF1A-212ENST00000539372 FILIP1Q7Z7B0 1213 aa20.21■□□□□ 0.83
TNFRSF1A-212ENST00000539372 ZMIZ2Q8NF64 920 aa20.21■□□□□ 0.83
TNFRSF1A-212ENST00000539372 NIF3L1Q9GZT8 377 aa20.21■□□□□ 0.83
TNFRSF1A-212ENST00000539372 POLR3BQ9NW08 1133 aaPredicted RBP20.21■□□□□ 0.83
TNFRSF1A-212ENST00000539372 GMIPQ9P107 970 aa20.21■□□□□ 0.83
TNFRSF1A-212ENST00000539372 CFAP97Q9P2B7 532 aa20.21■□□□□ 0.83
TNFRSF1A-212ENST00000539372 OTOGLQ3ZCN5 2332 aa20.21■□□□□ 0.83
TNFRSF1A-212ENST00000539372 HELZP42694 1942 aaKnown RBP20.2■□□□□ 0.82
TNFRSF1A-212ENST00000539372 CETN3O15182 167 aa20.2■□□□□ 0.82
TNFRSF1A-212ENST00000539372 RNF40O75150 1001 aa20.2■□□□□ 0.82
TNFRSF1A-212ENST00000539372 SMC2O95347 1197 aa20.2■□□□□ 0.82
TNFRSF1A-212ENST00000539372 EPB41P11171 864 aaKnown RBP20.2■□□□□ 0.82
TNFRSF1A-212ENST00000539372 ENPEPQ07075 957 aa20.2■□□□□ 0.82
TNFRSF1A-212ENST00000539372 INCA1Q0VD86 236 aa20.2■□□□□ 0.82
TNFRSF1A-212ENST00000539372 NR1H3Q13133 447 aa20.2■□□□□ 0.82
TNFRSF1A-212ENST00000539372 ZNF658Q5TYW1 1059 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF1A-212ENST00000539372 PRR23BQ6ZRT6 265 aa20.2■□□□□ 0.82
TNFRSF1A-212ENST00000539372 CCDC150Q8NCX0 1101 aa20.2■□□□□ 0.82
TNFRSF1A-212ENST00000539372 PDZD8Q8NEN9 1154 aa20.2■□□□□ 0.82
TNFRSF1A-212ENST00000539372 OVCA2Q8WZ82 227 aa20.2■□□□□ 0.82
TNFRSF1A-212ENST00000539372 SEMA4DQ92854 862 aa20.2■□□□□ 0.82
TNFRSF1A-212ENST00000539372 CD101Q93033 1021 aa20.2■□□□□ 0.82
TNFRSF1A-212ENST00000539372 CYP3A43Q9HB55 503 aa20.2■□□□□ 0.82
TNFRSF1A-212ENST00000539372 PCDHA5Q9Y5H7 936 aa20.2■□□□□ 0.82
TNFRSF1A-212ENST00000539372 COCHO43405 550 aa20.19■□□□□ 0.82
TNFRSF1A-212ENST00000539372 NFATC1O95644 943 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms