RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 AMBRA1Q9C0C7 1298 aa3.67□□□□□ -1.82
SNHG1-210ENST00000539303 KLC2Q9H0B6 622 aa3.67□□□□□ -1.82
SNHG1-210ENST00000539303 CEP72Q9P209 647 aa3.67□□□□□ -1.82
SNHG1-210ENST00000539303 TRGV11A0A075B6L2 103 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 J3KTA2 159 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 EIF3FO00303 357 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-210ENST00000539303 RNASET2O00584 256 aaKnown RBP3.66□□□□□ -1.82
SNHG1-210ENST00000539303 COQ9O75208 318 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 TAF5LO75529 589 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 CDKL5O76039 1030 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 PYGLP06737 847 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 C1SP09871 688 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 SRGAP2BP0DMP2 458 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 CKMT1AP12532 417 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 IDEP14735 1019 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 PPIFP30405 207 aaKnown RBP3.66□□□□□ -1.82
SNHG1-210ENST00000539303 HTR7P34969 479 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 SELENOPP49908 381 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 CLCN2P51788 898 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 NSUN2Q08J23 767 aaKnown RBP eCLIP3.66□□□□□ -1.82
SNHG1-210ENST00000539303 PPFIA1Q13136 1202 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 FZD5Q13467 585 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 E2F2Q14209 437 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 HLXQ14774 488 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-210ENST00000539303 PRKD1Q15139 912 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-210ENST00000539303 CDSNQ15517 529 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 USP39Q53GS9 565 aaKnown RBP3.66□□□□□ -1.82
SNHG1-210ENST00000539303 WDR78Q5VTH9 848 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 ICE2Q659A1 982 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 ARL6IP4Q66PJ3 421 aaKnown RBP3.66□□□□□ -1.82
SNHG1-210ENST00000539303 SLC9A4Q6AI14 798 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 TANGO2Q6ICL3 276 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 DPY19L3Q6ZPD9 716 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 RRAGAQ7L523 313 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 MAVSQ7Z434 540 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 GPR149Q86SP6 731 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 MOGAT3Q86VF5 341 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 GATAD2AQ86YP4 633 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 ABRAQ8N0Z2 381 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 OTUD7AQ8TE49 926 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-210ENST00000539303 SSH3Q8TE77 659 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 SMCR8Q8TEV9 937 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-210ENST00000539303 ASB10Q8WXI3 467 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 GLG1Q92896 1179 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 FAM136AQ96C01 138 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 GRAMD1AQ96CP6 724 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 FAM227BQ96M60 508 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 HIST1H2AAQ96QV6 131 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 C17orf80Q9BSJ5 609 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 KRTAP9-2Q9BYQ4 174 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 KRTAP3-1Q9BYR8 98 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 TPSD1Q9BZJ3 242 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 ZBTB26Q9HCK0 441 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 TMEM8AQ9HCN3 771 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 CASS4Q9NQ75 786 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 GGA3Q9NZ52 723 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 DNAJB11Q9UBS4 358 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 DKK2Q9UBU2 259 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 GTF2A1LQ9UNN4 478 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 NEU2Q9Y3R4 380 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 TCAF1Q9Y4C2 921 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 NOX1Q9Y5S8 564 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 FNDC1Q4ZHG4 1894 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-210ENST00000539303 SPATA31A3Q5VYP0 1347 aa3.66□□□□□ -1.82
SNHG1-210ENST00000539303 HMX3A6NHT5 357 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 ZAR1LA6NP61 321 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 VWC2LB2RUY7 222 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 TISP43B9A030 160 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 MUSKO15146 869 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 DHHO43323 396 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 TRIAP1O43715 76 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 SOAT2O75908 522 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 ACTL6BO94805 426 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 ANXA6P08133 673 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 SRGNP10124 158 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 DDX6P26196 483 aaKnown RBP eCLIP3.65□□□□□ -1.83
SNHG1-210ENST00000539303 CNTFP26441 200 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 CCT5P48643 541 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 PDE6CP51160 858 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 BCAT1P54687 386 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 DGCR2P98153 550 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 SATB1Q01826 763 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 PLP2Q04941 152 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 CUL4BQ13620 913 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 ATP1A4Q13733 1029 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 NFIXQ14938 502 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 SF3B3Q15393 1217 aaKnown RBP3.65□□□□□ -1.83
SNHG1-210ENST00000539303 ALFQ53S48 1182 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 HS1BP3Q53T59 392 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 CERCAMQ5T4B2 595 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 USP17L6PQ6QN14 398 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 KLHL17Q6TDP4 642 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 CLEC9AQ6UXN8 241 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 RASGRP3Q8IV61 690 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 C1orf210Q8IVY1 113 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 CLASRPQ8N2M8 674 aaKnown RBP3.65□□□□□ -1.83
SNHG1-210ENST00000539303 ZNF276Q8N554 614 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 CHST13Q8NET6 341 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 MYCBPAPQ8TBZ2 947 aa3.65□□□□□ -1.83
SNHG1-210ENST00000539303 CSGALNACT1Q8TDX6 532 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms