RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 SNX16P57768 344 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 CREMQ03060 361 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 IFRD2Q12894 506 aaPredicted RBP14.9□□□□□ -0.02
CD4-208ENST00000538827 PTPN14Q15678 1187 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 MGAT5BQ3V5L5 792 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 PPP2R2DQ66LE6 453 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 PMF1Q6P1K2 205 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 RNF19BQ6ZMZ0 732 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 ZNF662Q6ZS27 426 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 FAM183BPQ6ZVS7 135 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 PIGZQ86VD9 579 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 RHOT2Q8IXI1 618 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 SIX6OS1Q8N1H7 587 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 TTC9BQ8N6N2 239 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 ZNF564Q8TBZ8 553 aaPredicted RBP14.9□□□□□ -0.02
CD4-208ENST00000538827 SLC35F5Q8WV83 523 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 POF1BQ8WVV4 589 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 C18orf8Q96DM3 657 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 SAMD11Q96NU1 681 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 ALS2CR12Q96Q35 445 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 TCF25Q9BQ70 676 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 PLVAPQ9BX97 442 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 CERS4Q9HA82 394 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 LRRC4Q9HBW1 653 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 OSGEPQ9NPF4 335 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 AVENQ9NQS1 362 aaPredicted RBP14.9□□□□□ -0.02
CD4-208ENST00000538827 METTL5Q9NRN9 209 aaKnown RBP14.9□□□□□ -0.02
CD4-208ENST00000538827 CAPN6Q9Y6Q1 641 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 SCINQ9Y6U3 715 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 ATG2AQ2TAZ0 1938 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 A0A0A6YYK5 440 aaPredicted RBP14.89□□□□□ -0.03
CD4-208ENST00000538827 WDR27A2RRH5 827 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 BTNL10A8MVZ5 291 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 F8VP50 259 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 TBC1D4O60343 1298 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 CYP1A2P05177 515 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 ACADSBP45954 432 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 GPR15P49685 360 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 GNG11P61952 73 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 TAP1Q03518 808 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 ADIGQ0VDE8 80 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 IFI16Q16666 785 aaKnown RBP14.89□□□□□ -0.03
CD4-208ENST00000538827 ZNF569Q5MCW4 686 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 FAM102AQ5T9C2 384 aaPredicted RBP14.89□□□□□ -0.03
CD4-208ENST00000538827 SLC8B1Q6J4K2 584 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 XYLT1Q86Y38 959 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 ATAD1Q8NBU5 361 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 ZMIZ2Q8NF64 920 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 SLC35G2Q8TBE7 412 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 SPPL2BQ8TCT7 592 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 FUBP3Q96I24 572 aaKnown RBP eCLIP14.89□□□□□ -0.03
CD4-208ENST00000538827 VCPIP1Q96JH7 1222 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 C11orf16Q9NQ32 467 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.89□□□□□ -0.03
CD4-208ENST00000538827 TMEM30AQ9NV96 361 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 WDR35Q9P2L0 1181 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 SALL4Q9UJQ4 1053 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 SSX2IPQ9Y2D8 614 aa14.89□□□□□ -0.03
CD4-208ENST00000538827 CHD7Q9P2D1 2997 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 PI4K2BG5E9Z4 385 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 TRIM66O15016 1216 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 ZNF500O60304 480 aaPredicted RBP14.88□□□□□ -0.03
CD4-208ENST00000538827 SOAT2O75908 522 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 CXCL14O95715 111 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 NDUFV1P49821 464 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 ADCY1Q08828 1119 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 SMARCB1Q12824 385 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 GPR17Q13304 367 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 GPM6BQ13491 265 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 SMC1AQ14683 1233 aaKnown RBP14.88□□□□□ -0.03
CD4-208ENST00000538827 SKIV2LQ15477 1246 aaKnown RBP14.88□□□□□ -0.03
CD4-208ENST00000538827 PTPROQ16827 1216 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 CFAP221Q4G0U5 840 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 SDHAF4Q5VUM1 108 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 GPRIN1Q7Z2K8 1008 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 SLC35F6Q8N357 371 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 C3orf20Q8ND61 904 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 STKLD1Q8NE28 680 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 STK32AQ8WU08 396 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 C2orf15Q8WU43 125 aaKnown RBP14.88□□□□□ -0.03
CD4-208ENST00000538827 HSFY1Q96LI6 401 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 MCEEQ96PE7 176 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 KCNK16Q96T55 309 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 CLSTN3Q9BQT9 956 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 SLC4A5Q9BY07 1137 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 IRX2Q9BZI1 471 aaPredicted RBP14.88□□□□□ -0.03
CD4-208ENST00000538827 MRPL47Q9HD33 250 aaKnown RBP14.88□□□□□ -0.03
CD4-208ENST00000538827 TLR9Q9NR96 1032 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 PARVAQ9NVD7 372 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 UVRAGQ9P2Y5 699 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 ANAPC7Q9UJX3 599 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 LZTS1Q9Y250 596 aa14.88□□□□□ -0.03
CD4-208ENST00000538827 PRR33A8MZF0 331 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 C5orf67F2Z3F1 127 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 GRM6O15303 877 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 RB1P06400 928 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 HAPLN1P10915 354 aaPredicted RBP14.87□□□□□ -0.03
CD4-208ENST00000538827 POU3F3P20264 500 aaPredicted RBP14.87□□□□□ -0.03
CD4-208ENST00000538827 MAGEA11P43364 429 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 GABRB2P47870 512 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms