RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 CLEC20AQ6ZU45 233 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 ZNF677Q86XU0 584 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 MICALL1Q8N3F8 863 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 EFHBQ8N7U6 833 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 ANKRD52Q8NB46 1076 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 SLC7A14Q8TBB6 771 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 UBA3Q8TBC4 463 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 MYO1AQ9UBC5 1043 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 INTUQ9ULD6 942 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 INSL5Q9Y5Q6 135 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 CAPN6Q9Y6Q1 641 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 NCANO14594 1321 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 OBSL1O75147 1896 aa18.18■□□□□ 0.5
CLN6-202ENST00000538696 PRRG1O14668 218 aa18.18■□□□□ 0.5
CLN6-202ENST00000538696 C8AP07357 584 aa18.18■□□□□ 0.5
CLN6-202ENST00000538696 TMEM253P0C7T8 217 aa18.18■□□□□ 0.5
CLN6-202ENST00000538696 NPR3P17342 541 aa18.18■□□□□ 0.5
CLN6-202ENST00000538696 ATF6P18850 670 aa18.18■□□□□ 0.5
CLN6-202ENST00000538696 CASQ1P31415 396 aa18.18■□□□□ 0.5
CLN6-202ENST00000538696 BCAT1P54687 386 aa18.18■□□□□ 0.5
CLN6-202ENST00000538696 LIN9Q5TKA1 542 aa18.18■□□□□ 0.5
CLN6-202ENST00000538696 VSTM1Q6UX27 236 aa18.18■□□□□ 0.5
CLN6-202ENST00000538696 PASD1Q8IV76 773 aa18.18■□□□□ 0.5
CLN6-202ENST00000538696 SCN4BQ8IWT1 228 aa18.18■□□□□ 0.5
CLN6-202ENST00000538696 ARHGEF26Q96DR7 871 aa18.18■□□□□ 0.5
CLN6-202ENST00000538696 DUSP16Q9BY84 665 aa18.18■□□□□ 0.5
CLN6-202ENST00000538696 CSNK1G1Q9HCP0 422 aa18.18■□□□□ 0.5
CLN6-202ENST00000538696 DMAP1Q9NPF5 467 aaPredicted RBP18.18■□□□□ 0.5
CLN6-202ENST00000538696 HESX1Q9UBX0 185 aa18.18■□□□□ 0.5
CLN6-202ENST00000538696 DOCK6Q96HP0 2047 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 BTNL10A8MVZ5 291 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 F8VP50 259 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 TULP2O00295 520 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 TRIM66O15016 1216 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 BUB1O43683 1085 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 RTN2O75298 545 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 FTLP02792 175 aaPredicted RBP18.17■□□□□ 0.5
CLN6-202ENST00000538696 GZMAP12544 262 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 FOSL2P15408 326 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 ABCB4P21439 1286 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 TUFMP49411 452 aaKnown RBP18.17■□□□□ 0.5
CLN6-202ENST00000538696 MAP3K7CLP57077 242 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 PDE4CQ08493 712 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 BST2Q10589 180 aaKnown RBP18.17■□□□□ 0.5
CLN6-202ENST00000538696 DDR2Q16832 855 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 SDHAF4Q5VUM1 108 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 CCDC149Q6ZUS6 474 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 STKLD1Q8NE28 680 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 HDAC7Q8WUI4 952 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 CASP10Q92851 521 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 KCNK16Q96T55 309 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 ISCUQ9H1K1 167 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 PLEKHA4Q9H4M7 779 aa18.17■□□□□ 0.5
CLN6-202ENST00000538696 ZMYND10O75800 440 aa18.16■□□□□ 0.5
CLN6-202ENST00000538696 CYP1A1P04798 512 aaPredicted RBP18.16■□□□□ 0.5
CLN6-202ENST00000538696 SETSIPP0DME0 302 aa18.16■□□□□ 0.5
CLN6-202ENST00000538696 GRIK1P39086 918 aa18.16■□□□□ 0.5
CLN6-202ENST00000538696 GPD2P43304 727 aa18.16■□□□□ 0.5
CLN6-202ENST00000538696 TWF1Q12792 350 aa18.16■□□□□ 0.5
CLN6-202ENST00000538696 TRIM72Q6ZMU5 477 aa18.16■□□□□ 0.5
CLN6-202ENST00000538696 C8orf48Q96LL4 319 aa18.16■□□□□ 0.5
CLN6-202ENST00000538696 THAP2Q9H0W7 228 aa18.16■□□□□ 0.5
CLN6-202ENST00000538696 PDCL3Q9H2J4 239 aa18.16■□□□□ 0.5
CLN6-202ENST00000538696 CYTH4Q9UIA0 394 aa18.16■□□□□ 0.5
CLN6-202ENST00000538696 NOTCH4Q99466 2003 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 DENND4CQ5VZ89 1909 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 ANKRD62A6NC57 917 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 HHLA1C9JL84 531 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 XPO1O14980 1071 aaKnown RBP18.15■□□□□ 0.5
CLN6-202ENST00000538696 RFPL2O75678 378 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 UNGP13051 313 aaPredicted RBP18.15■□□□□ 0.5
CLN6-202ENST00000538696 CDH5P33151 784 aaPredicted RBP18.15■□□□□ 0.5
CLN6-202ENST00000538696 RPL10AP62906 217 aaKnown RBP18.15■□□□□ 0.5
CLN6-202ENST00000538696 NOMO3P69849 1222 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 ADAM15Q13444 863 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 COL19A1Q14993 1142 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 PPM1LQ5SGD2 360 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 NAA35Q5VZE5 725 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 ACAD10Q6JQN1 1059 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 TMEM184AQ6ZMB5 413 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 GPRIN1Q7Z2K8 1008 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 PIGZQ86VD9 579 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 WDTC1Q8N5D0 677 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 RNF10Q8N5U6 811 aaKnown RBP18.15■□□□□ 0.5
CLN6-202ENST00000538696 C1orf131Q8NDD1 294 aaKnown RBP18.15■□□□□ 0.5
CLN6-202ENST00000538696 FEZF2Q8TBJ5 459 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 GPR152Q8TDT2 470 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 CTNNBL1Q8WYA6 563 aaPredicted RBP18.15■□□□□ 0.5
CLN6-202ENST00000538696 NOX5Q96PH1 765 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 NAPGQ99747 312 aaPredicted RBP18.15■□□□□ 0.5
CLN6-202ENST00000538696 LHX5Q9H2C1 402 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 DZANK1Q9NVP4 752 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 DPP7Q9UHL4 492 aa18.15■□□□□ 0.5
CLN6-202ENST00000538696 A0A0A6YYK5 440 aaPredicted RBP18.14■□□□□ 0.49
CLN6-202ENST00000538696 TBX10O75333 385 aa18.14■□□□□ 0.49
CLN6-202ENST00000538696 LRG1P02750 347 aa18.14■□□□□ 0.49
CLN6-202ENST00000538696 HOXA9P31269 272 aa18.14■□□□□ 0.49
CLN6-202ENST00000538696 PLA2G4AP47712 749 aa18.14■□□□□ 0.49
CLN6-202ENST00000538696 NAP1L1P55209 391 aaKnown RBP18.14■□□□□ 0.49
CLN6-202ENST00000538696 PLD1Q13393 1074 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms