RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 RNF19BQ6ZMZ0 732 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CLEC20AQ6ZU45 233 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MON1BQ7L1V2 547 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ZDHHC17Q8IUH5 632 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SCUBE3Q8IX30 993 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TDHQ8IZJ6 230 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 WDTC1Q8N5D0 677 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ATAD1Q8NBU5 361 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TRIM58Q8NG06 486 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 FEZF2Q8TBJ5 459 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SLC35F5Q8WV83 523 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CPXM1Q96SM3 734 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 KCNK16Q96T55 309 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 GDF15Q99988 308 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 RHOBTB2Q9BYZ6 727 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 UBXN6Q9BZV1 441 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 NGRNQ9NPE2 291 aaKnown RBP11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CYLDQ9NQC7 956 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CHST7Q9NS84 486 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 EHD2Q9NZN4 543 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 LCMT1Q9UIC8 334 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ANAPC7Q9UJX3 599 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 AMFRQ9UKV5 643 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 LZTS1Q9Y250 596 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 USTQ9Y2C2 406 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 DUSP10Q9Y6W6 482 aa11.22□□□□□ -0.61
TNFRSF1A-211ENST00000538363 COL4A4P53420 1690 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MTMR11A4FU01 709 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 RCCD1A6NED2 376 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 BTNL10A8MVZ5 291 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SPOPO43791 374 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 RNF8O76064 485 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ABL1P00519 1130 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ERBB2P04626 1255 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CYP1A2P05177 515 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 BMP8BP34820 402 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MAGEA11P43364 429 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PLA2G4AP47712 749 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 EPHB3P54753 998 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SLC6A3Q01959 620 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ROR1Q01973 937 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 DUSP4Q13115 394 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PLD1Q13393 1074 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 DDR2Q16832 855 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CCDC142Q17RM4 750 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PTPN20Q4JDL3 420 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 FAM109BQ6ICB4 259 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PDE12Q6L8Q7 609 aaKnown RBP11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SYT10Q6XYQ8 523 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ZNF662Q6ZS27 426 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CCDC149Q6ZUS6 474 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PEX26Q7Z412 305 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ELMOD1Q8N336 334 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 KIF18AQ8NI77 898 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ZNF461Q8TAF7 563 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SPPL3Q8TCT6 385 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PPP2R3CQ969Q6 453 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ARHGEF26Q96DR7 871 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SMOQ99835 787 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TMEM121BQ9BXQ6 578 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SLC4A5Q9BY07 1137 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ZBP1Q9H171 429 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 FBXO44Q9H4M3 255 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ABCB6Q9NP58 842 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 AVENQ9NQS1 362 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 METTL5Q9NRN9 209 aaKnown RBP11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 KCND1Q9NSA2 647 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 FNIP2Q9P278 1114 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 AFF4Q9UHB7 1163 aaKnown RBP11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CHORDC1Q9UHD1 332 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 IP6K2Q9UHH9 426 aa11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MAGED2Q9UNF1 606 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1A-211ENST00000538363 NCANO14594 1321 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 A0A0U1RQJ8 604 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 CTAGE9A4FU28 777 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 TULP2O00295 520 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 ZNF500O60304 480 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 PALMO75781 387 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 GRAP2O75791 330 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 BEST1O76090 585 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 RTN3O95197 1032 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 ZBED1O96006 694 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 LRG1P02750 347 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 USP17L7P0C7H9 530 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 HAPLN1P10915 354 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 PSMA2P25787 234 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 PBX2P40425 430 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 ARHGAP25P42331 645 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 DNA2P51530 1060 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 ERVK-21P61565 698 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 RAB33AQ14088 237 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 PTPROQ16827 1216 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 CFAP221Q4G0U5 840 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 BTBD8Q5XKL5 378 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 SLC8B1Q6J4K2 584 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 FAM183BPQ6ZVS7 135 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 PAQR9Q6ZVX9 377 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 RSRC2Q7L4I2 434 aaKnown RBP11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 XYLT1Q86Y38 959 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms