RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 TAS2R42Q7RTR8 314 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 PRUNE1Q86TP1 453 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 ZNF598Q86UK7 904 aaKnown RBP8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 CCDC33Q8N5R6 958 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 TCP10LQ8TDR4 215 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 ADAMTS16Q8TE57 1224 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 RAPGEF4Q8WZA2 1011 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 RMND5BQ96G75 393 aaPredicted RBP8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 POP1Q99575 1024 aaKnown RBP8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 DHRS9Q9BPW9 319 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 TRIM56Q9BRZ2 755 aaKnown RBP8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 CCDC106Q9BWC9 280 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 GCOM2Q9BZD3 368 aaPredicted RBP8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 DNAJC18Q9H819 358 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 ZFYVE28Q9HCC9 887 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 DDX56Q9NY93 547 aaKnown RBP8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 PRR36Q9H6K5 1346 aa8.87□□□□□ -0.99
SRGAP1-202ENST00000537556 LAMB4A4D0S4 1761 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 FAM237BA0A1B0GVD1 139 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 PRAMEF22A3QJZ6 481 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 I3L4J1 428 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 PSMD11O00231 422 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 IRS4O14654 1257 aaPredicted RBP8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 KLHL41O60662 606 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 TMCC2O75069 709 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 SERPINA6P08185 405 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 AOC1P19801 751 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 GNG2P59768 71 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 FOXO4P98177 505 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 GK3PQ14409 553 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 SF3B3Q15393 1217 aaKnown RBP8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 TMC5Q6UXY8 1006 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 DYMQ7RTS9 669 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 SLC51BQ86UW2 128 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 DGKHQ86XP1 1220 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 GLYCTKQ8IVS8 523 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 HSPH1Q92598 858 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 ATP2A3Q93084 1043 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 C8orf48Q96LL4 319 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 WRNIP1Q96S55 665 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 C17orf80Q9BSJ5 609 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 RIC8BQ9NVN3 520 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 CDH22Q9UJ99 828 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 DSEQ9UL01 958 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 SLC8A2Q9UPR5 921 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 CPQQ9Y646 472 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 MYH3P11055 1940 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 A0A087WXM4 84 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 A0A1W2PPM1 405 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 FAM172BPA6NC97 362 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 MYMKA6NI61 221 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 H3BNH8 94 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 J3QRK9 145 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 HAT1O14929 419 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 ALX3O95076 343 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 FKBP9O95302 570 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 SCNN1DP51172 638 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 CASP7P55210 303 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 TPTEP56180 551 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 BASP1P80723 227 aaKnown RBP8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 SLC25A3Q00325 362 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 SELENBP1Q13228 472 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 PDK1Q15118 436 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 SEC23AQ15436 765 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 CCDC58Q4VC31 144 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 TJAP1Q5JTD0 557 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 IFIT1BQ5T764 474 aaKnown RBP8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 CYP4V2Q6ZWL3 525 aaPredicted RBP8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 SETD3Q86TU7 594 aaPredicted RBP8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 TNIP2Q8NFZ5 429 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 LNX1Q8TBB1 728 aaPredicted RBP8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 RASSF5Q8WWW0 418 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 FBXL8Q96CD0 374 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 CCDC124Q96CT7 223 aaKnown RBP8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 RMDN1Q96DB5 314 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 KCNK16Q96T55 309 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 ZNF304Q9HCX3 659 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 ANLNQ9NQW6 1124 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 PNPLA3Q9NST1 481 aa8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 CNOT11Q9UKZ1 510 aaKnown RBP8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 SF3B1O75533 1304 aaKnown RBP eCLIP8.86□□□□□ -0.99
SRGAP1-202ENST00000537556 PRR5-ARHGAP8B1AHC4 643 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 H0YJX3 145 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 KLF11O14901 512 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 SNAP91O60641 907 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 ADORA1P30542 326 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 CLK3P49761 638 aaKnown RBP8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 COPAP53621 1224 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 JAM2P57087 298 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 TXNL4AP83876 142 aaKnown RBP8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 ARHGAP8P85298 464 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 IFITM2Q01629 132 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 LRRC41Q15345 812 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 SIX1Q15475 284 aaPredicted RBP8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 PFKFB3Q16875 520 aaPredicted RBP8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 CAVIN4Q5BKX8 364 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 ZNF618Q5T7W0 954 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 ZNF354CQ86Y25 554 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 SEPT12Q8IYM1 358 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 SLC15A4Q8N697 577 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms