RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 MMP8P22894 467 aa25.56■■□□□ 1.68
HMGA2-208ENST00000537429 HOXA9P31269 272 aa25.56■■□□□ 1.68
HMGA2-208ENST00000537429 NSFP46459 744 aaKnown RBP25.56■■□□□ 1.68
HMGA2-208ENST00000537429 PLD1Q13393 1074 aa25.56■■□□□ 1.68
HMGA2-208ENST00000537429 PPM1LQ5SGD2 360 aa25.56■■□□□ 1.68
HMGA2-208ENST00000537429 PPP1R2P3Q6NXS1 205 aa25.56■■□□□ 1.68
HMGA2-208ENST00000537429 DENND5BQ6ZUT9 1274 aa25.56■■□□□ 1.68
HMGA2-208ENST00000537429 ERICH1Q86X53 443 aa25.56■■□□□ 1.68
HMGA2-208ENST00000537429 GIPC2Q8TF65 315 aa25.56■■□□□ 1.68
HMGA2-208ENST00000537429 CASP10Q92851 521 aa25.56■■□□□ 1.68
HMGA2-208ENST00000537429 ZNF263O14978 683 aa25.55■■□□□ 1.68
HMGA2-208ENST00000537429 NDUFA10O95299 355 aa25.55■■□□□ 1.68
HMGA2-208ENST00000537429 GLP2RO95838 553 aa25.55■■□□□ 1.68
HMGA2-208ENST00000537429 LRG1P02750 347 aa25.55■■□□□ 1.68
HMGA2-208ENST00000537429 FOSL2P15408 326 aa25.55■■□□□ 1.68
HMGA2-208ENST00000537429 ACADSBP45954 432 aa25.55■■□□□ 1.68
HMGA2-208ENST00000537429 SLC5A3P53794 718 aa25.55■■□□□ 1.68
HMGA2-208ENST00000537429 PTP4A2Q12974 167 aa25.55■■□□□ 1.68
HMGA2-208ENST00000537429 CCDC122Q5T0U0 273 aa25.55■■□□□ 1.68
HMGA2-208ENST00000537429 STKLD1Q8NE28 680 aa25.55■■□□□ 1.68
HMGA2-208ENST00000537429 GUCD1Q96NT3 240 aa25.55■■□□□ 1.68
HMGA2-208ENST00000537429 KCNF1Q9H3M0 494 aa25.55■■□□□ 1.68
HMGA2-208ENST00000537429 LRRC4Q9HBW1 653 aa25.55■■□□□ 1.68
HMGA2-208ENST00000537429 ZDHHC7Q9NXF8 308 aa25.55■■□□□ 1.68
HMGA2-208ENST00000537429 IL37Q9NZH6 218 aa25.55■■□□□ 1.68
HMGA2-208ENST00000537429 TJP2Q9UDY2 1190 aa25.55■■□□□ 1.68
HMGA2-208ENST00000537429 GREB1Q4ZG55 1949 aa25.54■■□□□ 1.68
HMGA2-208ENST00000537429 SLC38A8A6NNN8 435 aa25.54■■□□□ 1.68
HMGA2-208ENST00000537429 EIF3CLB5ME19 914 aaKnown RBP25.54■■□□□ 1.68
HMGA2-208ENST00000537429 E5RJQ4 531 aa25.54■■□□□ 1.68
HMGA2-208ENST00000537429 ARHGAP6O43182 974 aa25.54■■□□□ 1.68
HMGA2-208ENST00000537429 NRDCO43847 1150 aa25.54■■□□□ 1.68
HMGA2-208ENST00000537429 RFPL2O75678 378 aa25.54■■□□□ 1.68
HMGA2-208ENST00000537429 FTLP02792 175 aaPredicted RBP25.54■■□□□ 1.68
HMGA2-208ENST00000537429 SRGAP2BP0DMP2 458 aa25.54■■□□□ 1.68
HMGA2-208ENST00000537429 GABRB2P47870 512 aa25.54■■□□□ 1.68
HMGA2-208ENST00000537429 EPHB3P54753 998 aa25.54■■□□□ 1.68
HMGA2-208ENST00000537429 EP400NLQ6ZTU2 488 aa25.54■■□□□ 1.68
HMGA2-208ENST00000537429 MON1BQ7L1V2 547 aa25.54■■□□□ 1.68
HMGA2-208ENST00000537429 DNAAF5Q86Y56 855 aa25.54■■□□□ 1.68
HMGA2-208ENST00000537429 SCAMP5Q8TAC9 235 aa25.54■■□□□ 1.68
HMGA2-208ENST00000537429 EIF3CQ99613 913 aaKnown RBP25.54■■□□□ 1.68
HMGA2-208ENST00000537429 MTMR10Q9NXD2 777 aa25.54■■□□□ 1.68
HMGA2-208ENST00000537429 USP3Q9Y6I4 520 aa25.54■■□□□ 1.68
HMGA2-208ENST00000537429 LINC01565O15544 149 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 PAPLNO95428 1278 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 HNRNPA1P09651 372 aaKnown RBP eCLIP25.53■■□□□ 1.68
HMGA2-208ENST00000537429 TKTL1P51854 596 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 ADAM15Q13444 863 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 MTMR3Q13615 1198 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 VEPH1Q14D04 833 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 MSANTD4Q8NCY6 345 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 PSMG2Q969U7 264 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 C18orf8Q96DM3 657 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 ZNF830Q96NB3 372 aaPredicted RBP25.53■■□□□ 1.68
HMGA2-208ENST00000537429 ASB3Q9Y575 518 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 PIK3R2O00459 728 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 ERBB2P04626 1255 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 CSH1P0DML2 217 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 CSH2P0DML3 217 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 LCP1P13796 627 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 HMGA1P17096 107 aaKnown RBP25.53■■□□□ 1.68
HMGA2-208ENST00000537429 SNX16P57768 344 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 USP46P62068 366 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 C1QBPQ07021 282 aaKnown RBP25.53■■□□□ 1.68
HMGA2-208ENST00000537429 ADIGQ0VDE8 80 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 CTC1Q2NKJ3 1217 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 C2CD6Q53TS8 623 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 MMS22LQ6ZRQ5 1243 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 DNAJB7Q7Z6W7 309 aaPredicted RBP25.53■■□□□ 1.68
HMGA2-208ENST00000537429 MCOLN2Q8IZK6 566 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 IPO4Q8TEX9 1081 aaKnown RBP25.53■■□□□ 1.68
HMGA2-208ENST00000537429 VCPIP1Q96JH7 1222 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 C11orf70Q9BRQ4 267 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 DZANK1Q9NVP4 752 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 COMMD8Q9NX08 183 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 ADAM22Q9P0K1 906 aa25.53■■□□□ 1.68
HMGA2-208ENST00000537429 FAM92AA1XBS5 289 aa25.52■■□□□ 1.68
HMGA2-208ENST00000537429 RTN3O95197 1032 aaPredicted RBP25.52■■□□□ 1.68
HMGA2-208ENST00000537429 COL19A1Q14993 1142 aa25.52■■□□□ 1.68
HMGA2-208ENST00000537429 CCDC85BQ15834 202 aaPredicted RBP25.52■■□□□ 1.68
HMGA2-208ENST00000537429 SCUBE3Q8IX30 993 aa25.52■■□□□ 1.68
HMGA2-208ENST00000537429 MYRFLQ96LU7 910 aa25.52■■□□□ 1.68
HMGA2-208ENST00000537429 TTLL2Q9BWV7 592 aa25.52■■□□□ 1.68
HMGA2-208ENST00000537429 SYNCQ9H7C4 482 aa25.52■■□□□ 1.68
HMGA2-208ENST00000537429 CNGB3Q9NQW8 809 aa25.52■■□□□ 1.68
HMGA2-208ENST00000537429 CCL16O15467 120 aa25.51■■□□□ 1.67
HMGA2-208ENST00000537429 PAPSS1O43252 624 aaPredicted RBP25.51■■□□□ 1.67
HMGA2-208ENST00000537429 NCK2O43639 380 aa25.51■■□□□ 1.67
HMGA2-208ENST00000537429 POU2F2P09086 479 aa25.51■■□□□ 1.67
HMGA2-208ENST00000537429 SPA17Q15506 151 aa25.51■■□□□ 1.67
HMGA2-208ENST00000537429 TAF12Q16514 161 aa25.51■■□□□ 1.67
HMGA2-208ENST00000537429 C10orf76Q5T2E6 689 aa25.51■■□□□ 1.67
HMGA2-208ENST00000537429 PM20D1Q6GTS8 502 aa25.51■■□□□ 1.67
HMGA2-208ENST00000537429 ITIH5Q86UX2 942 aa25.51■■□□□ 1.67
HMGA2-208ENST00000537429 SIX6OS1Q8N1H7 587 aa25.51■■□□□ 1.67
HMGA2-208ENST00000537429 SCML4Q8N228 414 aa25.51■■□□□ 1.67
HMGA2-208ENST00000537429 ELMOD1Q8N336 334 aa25.51■■□□□ 1.67
HMGA2-208ENST00000537429 PRKD2Q9BZL6 878 aa25.51■■□□□ 1.67
HMGA2-208ENST00000537429 ULBP1Q9BZM6 244 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms