RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 ASB14A6NK59 587 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 TSPAN1O60635 241 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 CTCFP49711 727 aaPredicted RBP13.46□□□□□ -0.25
TRIM25-202ENST00000537230 RGS7P49802 495 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 WDR4P57081 412 aaKnown RBP13.46□□□□□ -0.25
TRIM25-202ENST00000537230 GPX6P59796 221 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 TMEM132DQ14C87 1099 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 EFTUD2Q15029 972 aaKnown RBP eCLIP13.46□□□□□ -0.255e-8■■■□□ 17.3
TRIM25-202ENST00000537230 PKN2Q16513 984 aaKnown RBP13.46□□□□□ -0.25
TRIM25-202ENST00000537230 CDO1Q16878 200 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 FAM187BQ17R55 369 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 ZNF792Q3KQV3 632 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 ZNF484Q5JVG2 852 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 ANKRD20A2Q5SQ80 823 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 ANKRD20A1Q5TYW2 823 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 ANKRD20A3Q5VUR7 823 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 ARHGEF18Q6ZSZ5 1173 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 BBS12Q6ZW61 710 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 CYP4V2Q6ZWL3 525 aaPredicted RBP13.46□□□□□ -0.25
TRIM25-202ENST00000537230 CPT1BQ92523 772 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 VPS37BQ9H9H4 285 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 PCDH9Q9HC56 1237 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 FARP1Q9Y4F1 1045 aaPredicted RBP13.46□□□□□ -0.25
TRIM25-202ENST00000537230 PLXNB2O15031 1838 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 E5RJQ4 531 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 ADCY6O43306 1168 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 HCRTO43612 131 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 UNC5CO95185 931 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 RNASELQ05823 741 aaKnown RBP13.46□□□□□ -0.25
TRIM25-202ENST00000537230 LAMC2Q13753 1193 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 MORF4L2Q15014 288 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 MTHFD1LQ6UB35 978 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 FAM71DQ8N9W8 422 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 KCTD6Q8NC69 237 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 RNF217Q8TC41 542 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 FNIP1Q8TF40 1166 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 LRRN4Q8WUT4 740 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 SPDL1Q96EA4 605 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 MCRS1Q96EZ8 462 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 TMEM237Q96Q45 408 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 KATNBL1Q9H079 304 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 USP18Q9UMW8 372 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 HES2Q9Y543 173 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 NME7Q9Y5B8 376 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 CLUHO75153 1309 aa13.46□□□□□ -0.25
TRIM25-202ENST00000537230 H3BRB1 525 aa13.46□□□□□ -0.26
TRIM25-202ENST00000537230 TMEM63AO94886 807 aa13.46□□□□□ -0.26
TRIM25-202ENST00000537230 PFKMP08237 780 aa13.46□□□□□ -0.26
TRIM25-202ENST00000537230 KRT7P08729 469 aa13.46□□□□□ -0.26
TRIM25-202ENST00000537230 CCNB1P14635 433 aa13.46□□□□□ -0.26
TRIM25-202ENST00000537230 ATP2A2P16615 1042 aaKnown RBP13.46□□□□□ -0.26
TRIM25-202ENST00000537230 SSTR1P30872 391 aa13.46□□□□□ -0.26
TRIM25-202ENST00000537230 RPL22P35268 128 aaKnown RBP13.46□□□□□ -0.26
TRIM25-202ENST00000537230 ATP11AP98196 1134 aa13.46□□□□□ -0.26
TRIM25-202ENST00000537230 DNAJC3Q13217 504 aa13.46□□□□□ -0.26
TRIM25-202ENST00000537230 TAZQ16635 292 aa13.46□□□□□ -0.26
TRIM25-202ENST00000537230 KIZQ2M2Z5 673 aa13.46□□□□□ -0.26
TRIM25-202ENST00000537230 HOMEZQ8IX15 550 aa13.46□□□□□ -0.26
TRIM25-202ENST00000537230 C4orf33Q8N1A6 199 aa13.46□□□□□ -0.26
TRIM25-202ENST00000537230 ERP27Q96DN0 273 aa13.46□□□□□ -0.26
TRIM25-202ENST00000537230 PLCD4Q9BRC7 762 aa13.46□□□□□ -0.26
TRIM25-202ENST00000537230 MYLK2Q9H1R3 596 aa13.46□□□□□ -0.26
TRIM25-202ENST00000537230 TUT1Q9H6E5 874 aaKnown RBP13.46□□□□□ -0.26
TRIM25-202ENST00000537230 SLCO1B3Q9NPD5 702 aa13.46□□□□□ -0.26
TRIM25-202ENST00000537230 DPP3Q9NY33 737 aa13.46□□□□□ -0.26
TRIM25-202ENST00000537230 TSPAN16Q9UKR8 245 aa13.46□□□□□ -0.26
TRIM25-202ENST00000537230 ALOX15BO15296 676 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 MAP3K6O95382 1288 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 SNAI1O95863 264 aaPredicted RBP13.45□□□□□ -0.26
TRIM25-202ENST00000537230 ABHD2P08910 425 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 NBPF20Q3BBV1 942 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 RNF43Q68DV7 783 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 TRABD2AQ86V40 505 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 RFX6Q8HWS3 928 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 PPTC7Q8NI37 304 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 CFAP57Q96MR6 1250 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 ZMAT2Q96NC0 199 aaKnown RBP13.45□□□□□ -0.26
TRIM25-202ENST00000537230 ADPGKQ9BRR6 497 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 FAM167BQ9BTA0 163 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 ASB7Q9H672 318 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 ZNF408Q9H9D4 720 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 NKX1-2Q9UD57 310 aaPredicted RBP13.45□□□□□ -0.26
TRIM25-202ENST00000537230 A0A1W2PPM1 405 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 TRUB2O95900 331 aaKnown RBP13.45□□□□□ -0.26
TRIM25-202ENST00000537230 TARSP26639 723 aaKnown RBP13.45□□□□□ -0.26
TRIM25-202ENST00000537230 EPHX2P34913 555 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 GABRB2P47870 512 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 HADHQ16836 314 aaKnown RBP13.45□□□□□ -0.26
TRIM25-202ENST00000537230 FAM183BPQ6ZVS7 135 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 ZC3H18Q86VM9 953 aaKnown RBP13.45□□□□□ -0.26
TRIM25-202ENST00000537230 GPRC5AQ8NFJ5 357 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 CMASQ8NFW8 434 aaPredicted RBP13.45□□□□□ -0.26
TRIM25-202ENST00000537230 MICAL1Q8TDZ2 1067 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 CDHR5Q9HBB8 845 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.45□□□□□ -0.26
TRIM25-202ENST00000537230 GPATCH2LQ9NWQ4 482 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.45□□□□□ -0.26
TRIM25-202ENST00000537230 GJD2Q9UKL4 321 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 GRID1Q9ULK0 1009 aa13.45□□□□□ -0.26
TRIM25-202ENST00000537230 HTTP42858 3142 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms