RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 MAML2Q8IZL2 1156 aaPredicted RBP18.96■□□□□ 0.63
TNFRSF1A-209ENST00000536717 ARL14EPQ8N8R7 260 aaPredicted RBP18.96■□□□□ 0.63
TNFRSF1A-209ENST00000536717 TTC8Q8TAM2 541 aa18.96■□□□□ 0.63
TNFRSF1A-209ENST00000536717 SMARCD1Q96GM5 515 aa18.96■□□□□ 0.63
TNFRSF1A-209ENST00000536717 NIF3L1Q9GZT8 377 aa18.96■□□□□ 0.63
TNFRSF1A-209ENST00000536717 NAT10Q9H0A0 1025 aaKnown RBP18.96■□□□□ 0.63
TNFRSF1A-209ENST00000536717 GKN1Q9NS71 199 aa18.96■□□□□ 0.63
TNFRSF1A-209ENST00000536717 TRAV19A0A0A6YYK7 116 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 PROB1E7EW31 1015 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 CKMP06732 381 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 CTHP32929 405 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 NUP93Q8N1F7 819 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 C12orf29Q8N999 325 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 FBXL13Q8NEE6 735 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 ZMIZ2Q8NF64 920 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 WHAMMQ8TF30 809 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 MSANTD3Q96H12 275 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 MED10Q9BTT4 135 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 C8orf33Q9H7E9 229 aaPredicted RBP18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 CYP3A43Q9HB55 503 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 HPS4Q9NQG7 708 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 KRT82Q9NSB4 513 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 THG1LQ9NWX6 298 aaKnown RBP18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 EHD2Q9NZN4 543 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 TRPM5Q9NZQ8 1165 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 CFAP54Q96N23 3096 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 ATP8B3O60423 1300 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 ZNF840PA6NDX5 716 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 SPECC1L-ADORA2AF8WAN1 911 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 TNFRSF10BO14763 440 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 FGFR1OPO95684 399 aaKnown RBP18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 USP17L7P0C7H9 530 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 KPNA1P52294 538 aaPredicted RBP18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 IFRD2Q12894 506 aaPredicted RBP18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 TAF10Q12962 218 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 USP4Q13107 963 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 ZNF77Q15935 545 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 TPD52L1Q16890 204 aaPredicted RBP18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 CBWD6Q4V339 395 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 DCAF17Q5H9S7 520 aaPredicted RBP18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 WDR44Q5JSH3 913 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 CBWD3Q5JTY5 395 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 CBWD5Q5RIA9 395 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 TRIM68Q6AZZ1 485 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 SLC2A14Q8TDB8 520 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 FUCA2Q9BTY2 467 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 DMAP1Q9NPF5 467 aaPredicted RBP18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 FAM49BQ9NUQ9 324 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 SPATA6Q9NWH7 488 aaPredicted RBP18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 RAB20Q9NX57 234 aa18.95■□□□□ 0.62
TNFRSF1A-209ENST00000536717 OTOL1A6NHN0 477 aaPredicted RBP18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 STX10O60499 249 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 CILPO75339 1184 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 AP1G2O75843 785 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 BEST1O76090 585 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 CHRNB1P11230 501 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 HDCP19113 662 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 CD58P19256 250 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 ZXDBP98169 803 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 MTF1Q14872 753 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 ANO6Q4KMQ2 910 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 TCERG1LQ5VWI1 586 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 C1orf228Q6PIY5 440 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 C11orf57Q6ZUT1 292 aaPredicted RBP18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 FRMD5Q7Z6J6 570 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 RALGPS2Q86X27 583 aaPredicted RBP18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 CCDC150Q8NCX0 1101 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 SCAMP5Q8TAC9 235 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 SLC35C1Q96A29 364 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 CEP63Q96MT8 703 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 SMOQ99835 787 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 DUSP9Q99956 384 aaKnown RBP18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 EBF3Q9H4W6 596 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 COQ4Q9Y3A0 265 aa18.94■□□□□ 0.62
TNFRSF1A-209ENST00000536717 WDR87Q6ZQQ6 2873 aa18.93■□□□□ 0.62
TNFRSF1A-209ENST00000536717 OLFM2O95897 454 aa18.93■□□□□ 0.62
TNFRSF1A-209ENST00000536717 SP9P0CG40 484 aa18.93■□□□□ 0.62
TNFRSF1A-209ENST00000536717 PFKLP17858 780 aa18.93■□□□□ 0.62
TNFRSF1A-209ENST00000536717 PPP3CCP48454 512 aa18.93■□□□□ 0.62
TNFRSF1A-209ENST00000536717 SLC5A3P53794 718 aa18.93■□□□□ 0.62
TNFRSF1A-209ENST00000536717 RUNX3Q13761 415 aa18.93■□□□□ 0.62
TNFRSF1A-209ENST00000536717 ITPRIPL2Q3MIP1 535 aa18.93■□□□□ 0.62
TNFRSF1A-209ENST00000536717 CHFRQ96EP1 664 aa18.93■□□□□ 0.62
TNFRSF1A-209ENST00000536717 SLITRK1Q96PX8 696 aa18.93■□□□□ 0.62
TNFRSF1A-209ENST00000536717 NT5C1AQ9BXI3 368 aa18.93■□□□□ 0.62
TNFRSF1A-209ENST00000536717 RNF38Q9H0F5 515 aa18.93■□□□□ 0.62
TNFRSF1A-209ENST00000536717 CHRDQ9H2X0 955 aa18.93■□□□□ 0.62
TNFRSF1A-209ENST00000536717 LMAN1LQ9HAT1 526 aa18.93■□□□□ 0.62
TNFRSF1A-209ENST00000536717 CSNK1G1Q9HCP0 422 aa18.93■□□□□ 0.62
TNFRSF1A-209ENST00000536717 IL37Q9NZH6 218 aa18.93■□□□□ 0.62
TNFRSF1A-209ENST00000536717 ARMCX3Q9UH62 379 aaPredicted RBP18.93■□□□□ 0.62
TNFRSF1A-209ENST00000536717 ARHGAP26Q9UNA1 814 aa18.93■□□□□ 0.62
TNFRSF1A-209ENST00000536717 RTN3O95197 1032 aaPredicted RBP18.92■□□□□ 0.62
TNFRSF1A-209ENST00000536717 OAS1P00973 400 aaKnown RBP18.92■□□□□ 0.62
TNFRSF1A-209ENST00000536717 ARSAP15289 507 aa18.92■□□□□ 0.62
TNFRSF1A-209ENST00000536717 TCF3P15923 654 aa18.92■□□□□ 0.62
TNFRSF1A-209ENST00000536717 YWHAQP27348 245 aa18.92■□□□□ 0.62
TNFRSF1A-209ENST00000536717 MTAPQ13126 283 aa18.92■□□□□ 0.62
TNFRSF1A-209ENST00000536717 SH3RF2Q8TEC5 729 aa18.92■□□□□ 0.62
TNFRSF1A-209ENST00000536717 TATDN2Q93075 761 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms