RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 ALDH3B2P48448 385 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 GDF10P55107 478 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 MRPS5P82675 430 aaKnown RBP7.22□□□□□ -1.25
CPSF7-215ENST00000536145 ZNF200P98182 395 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-215ENST00000536145 MYBPC1Q00872 1141 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 DEUP1Q05D60 604 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 PTK7Q13308 1070 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 MTA1Q13330 715 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 PICALMQ13492 652 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 TLR1Q15399 786 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 SEPT7Q16181 437 aaKnown RBP7.22□□□□□ -1.25
CPSF7-215ENST00000536145 SNRNP35Q16560 246 aaKnown RBP7.22□□□□□ -1.25
CPSF7-215ENST00000536145 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.22□□□□□ -1.25
CPSF7-215ENST00000536145 NADK2Q4G0N4 442 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 ATG16L1Q676U5 607 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 TXNRD3NBQ6F5E7 133 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 CDC42EP5Q6NZY7 148 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 TATDN1Q6P1N9 297 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 TIFABQ6ZNK6 161 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 BBS12Q6ZW61 710 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 ARPINQ7Z6K5 226 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 ZNF554Q86TJ5 538 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 KBTBD6Q86V97 674 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 TMEM126BQ8IUX1 230 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 MAP4K3Q8IVH8 894 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 RTKN2Q8IZC4 609 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 NUP93Q8N1F7 819 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 CERS5Q8N5B7 392 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 SLC25A41Q8N5S1 370 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 ZBTB8BQ8NAP8 495 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-215ENST00000536145 POMGNT1Q8WZA1 660 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 APBB2Q92870 758 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 TEKT1Q969V4 418 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 E2F7Q96AV8 911 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 ELMO3Q96BJ8 720 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 NMD3Q96D46 503 aaKnown RBP7.22□□□□□ -1.25
CPSF7-215ENST00000536145 MRRFQ96E11 262 aaKnown RBP7.22□□□□□ -1.25
CPSF7-215ENST00000536145 ZFRQ96KR1 1074 aaKnown RBP7.22□□□□□ -1.25
CPSF7-215ENST00000536145 SRPK1Q96SB4 655 aaKnown RBP7.22□□□□□ -1.25
CPSF7-215ENST00000536145 CYTH2Q99418 400 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 C11orf70Q9BRQ4 267 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 LXNQ9BS40 222 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 TEKT3Q9BXF9 490 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 C20orf27Q9GZN8 174 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 ZNF395Q9H8N7 513 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-215ENST00000536145 TIMMDC1Q9NPL8 285 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 FAIMQ9NVQ4 179 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 KLHL11Q9NVR0 708 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 DDX56Q9NY93 547 aaKnown RBP7.22□□□□□ -1.25
CPSF7-215ENST00000536145 UBAP1Q9NZ09 502 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 ZNHIT2Q9UHR6 403 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 DMTF1Q9Y222 760 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 NR2E3Q9Y5X4 410 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 CEPT1Q9Y6K0 416 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 SCINQ9Y6U3 715 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 IVNS1ABPQ9Y6Y0 642 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 ADAMTSL1Q8N6G6 1762 aa7.22□□□□□ -1.25
CPSF7-215ENST00000536145 MYH11P35749 1972 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 TCRBV9S1A1TA0A576 114 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 TRIM49D1C9J1S8 452 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 E9PBE3 544 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 ZNF195O14628 629 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 DHX15O43143 795 aaKnown RBP7.21□□□□□ -1.26
CPSF7-215ENST00000536145 CHMP2AO43633 222 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 ATP6V1G1O75348 118 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 SPAG6O75602 509 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 PIAS1O75925 651 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 UFL1O94874 794 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 KLHL2O95198 593 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 CRTAMO95727 393 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 ALDH2P05091 517 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 ITGAXP20702 1163 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 MMP8P22894 467 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 VARSP26640 1264 aaKnown RBP7.21□□□□□ -1.26
CPSF7-215ENST00000536145 SLC5A2P31639 672 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 ELK3P41970 407 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 NSFP46459 744 aaKnown RBP7.21□□□□□ -1.26
CPSF7-215ENST00000536145 CD97P48960 835 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 SERPINB8P50452 374 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 ZNF132P52740 706 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 HIRAP54198 1017 aaPredicted RBP7.21□□□□□ -1.26
CPSF7-215ENST00000536145 ADARP55265 1226 aaKnown RBP7.21□□□□□ -1.26
CPSF7-215ENST00000536145 JAG1P78504 1218 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 SLC25A3Q00325 362 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 FOLH1Q04609 750 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 SPP2Q13103 211 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 NCOA4Q13772 614 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 UBAP2LQ14157 1087 aaKnown RBP7.21□□□□□ -1.26
CPSF7-215ENST00000536145 HIC1Q14526 733 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 KCNJ11Q14654 390 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 AOC3Q16853 763 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 FAM98CQ17RN3 349 aaKnown RBP7.21□□□□□ -1.26
CPSF7-215ENST00000536145 BBS9Q3SYG4 887 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 CRY2Q49AN0 593 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 CEP55Q53EZ4 464 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 C2CD6Q53TS8 623 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 MDH1BQ5I0G3 518 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 CFAP157Q5JU67 520 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 TEDDM1Q5T9Z0 273 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 TTC39BQ5VTQ0 682 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms