RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 GPR20Q99678 358 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 BRIP1Q9BX63 1249 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 C22orf23Q9BZE7 217 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 CD248Q9HCU0 757 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 SACM1LQ9NTJ5 587 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 TMEM74BQ9NUR3 256 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 TBCCD1Q9NVR7 557 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 TMOD3Q9NYL9 352 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 JAG2Q9Y219 1238 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 FAM50BQ9Y247 325 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 LRCH1Q9Y2L9 728 aa3.91□□□□□ -1.78
SNHG1-202ENST00000535689 WDR33Q9C0J8 1336 aaKnown RBP3.91□□□□□ -1.78
SNHG1-202ENST00000535689 DOT1LQ8TEK3 1739 aa3.9□□□□□ -1.78
SNHG1-202ENST00000535689 PRAMEF33A0A0G2JMD5 474 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 A0A1W2PS29 197 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 KLRG2A4D1S0 409 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-202ENST00000535689 LRRC14BA6NHZ5 514 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 M0QYG6 137 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 MYO1FO00160 1098 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 PRAMEF10O60809 474 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 RASSF9O75901 435 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 ANXA2P07355 339 aaKnown RBP3.9□□□□□ -1.79
SNHG1-202ENST00000535689 HSP90AB1P08238 724 aaKnown RBP3.9□□□□□ -1.79
SNHG1-202ENST00000535689 KCNA3P22001 575 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 HTR3AP46098 478 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 ANXA11P50995 505 aaKnown RBP3.9□□□□□ -1.79
SNHG1-202ENST00000535689 FMO1Q01740 532 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 GUCY1B3Q02153 619 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 EXOSC9Q06265 439 aaKnown RBP3.9□□□□□ -1.79
SNHG1-202ENST00000535689 TCF15Q12870 199 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 E2F2Q14209 437 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 ZRSR2Q15696 482 aaKnown RBP3.9□□□□□ -1.79
SNHG1-202ENST00000535689 PDCD2Q16342 344 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-202ENST00000535689 NRN1LQ496H8 165 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 FAM102AQ5T9C2 384 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-202ENST00000535689 SP5Q6BEB4 398 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-202ENST00000535689 APOA5Q6Q788 366 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 Q6ZSN1 163 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 MICALCLQ6ZW33 695 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 RNF44Q7L0R7 432 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 SKAP1Q86WV1 359 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 PPP1R3BQ86XI6 285 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.9□□□□□ -1.79
SNHG1-202ENST00000535689 CFAP52Q8N1V2 620 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 MPP5Q8N3R9 675 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 ZNF276Q8N554 614 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 ENAHQ8N8S7 591 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-202ENST00000535689 RNF169Q8NCN4 708 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 MORC4Q8TE76 937 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 SLC25A43Q8WUT9 341 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-202ENST00000535689 RAB24Q969Q5 203 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 SPSB4Q96A44 273 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 LTV1Q96GA3 475 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-202ENST00000535689 C8orf49Q96NF6 230 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 MYOCQ99972 504 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 SPATA5L1Q9BVQ7 753 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 C1orf43Q9BWL3 253 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 DPH1Q9BZG8 443 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 TINAGL1Q9GZM7 467 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-202ENST00000535689 BHMT2Q9H2M3 363 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 DHX36Q9H2U1 1008 aaKnown RBP3.9□□□□□ -1.79
SNHG1-202ENST00000535689 MYH16Q9H6N6 1097 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 TRMT13Q9NUP7 481 aaKnown RBP3.9□□□□□ -1.79
SNHG1-202ENST00000535689 INTS13Q9NVM9 706 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 FBXO34Q9NWN3 711 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 XPR1Q9UBH6 696 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 FZD1Q9UP38 647 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.9□□□□□ -1.79
SNHG1-202ENST00000535689 MAP3K19Q56UN5 1328 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 TRPM7Q96QT4 1865 aa3.9□□□□□ -1.79
SNHG1-202ENST00000535689 AKAP11Q9UKA4 1901 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 MAP2P11137 1827 aaKnown RBP3.89□□□□□ -1.79
SNHG1-202ENST00000535689 LOC102723971A0A1B0GUV8 181 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 TRIM43BA6NCK2 446 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 ERVV-2B6SEH9 535 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 AREL1O15033 823 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 CDKL5O76039 1030 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 ABHD16AO95870 558 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 CFIP05156 583 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 SETSIPP0DME0 302 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 HSPA8P11142 646 aaKnown RBP3.89□□□□□ -1.79
SNHG1-202ENST00000535689 PIM1P11309 404 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-202ENST00000535689 GYS1P13807 737 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 MAKP20794 623 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 PRKAR1BP31321 381 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 APOBEC3AP31941 199 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-202ENST00000535689 PXNP49023 591 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-202ENST00000535689 POLE2P56282 527 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 NXPH1P58417 271 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 RHBDL3P58872 404 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 RNASE9P60153 205 aaKnown RBP3.89□□□□□ -1.79
SNHG1-202ENST00000535689 KRT17Q04695 432 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 ITIH3Q06033 890 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 DYRK1AQ13627 763 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 SLC29A2Q14542 456 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 PTPAQ15257 358 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 USP39Q53GS9 565 aaKnown RBP3.89□□□□□ -1.79
SNHG1-202ENST00000535689 DGKKQ5KSL6 1271 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 GORABQ5T7V8 394 aa3.89□□□□□ -1.79
SNHG1-202ENST00000535689 SPTY2D1Q68D10 685 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms