RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 PRPF6O94906 941 aaKnown RBP11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 CAVIN2O95810 425 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 CYP17A1P05093 508 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 C7P10643 843 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 CEACAM1P13688 526 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 GNL1P36915 607 aaPredicted RBP11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 AP3M2P53677 418 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 USP46P62068 366 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 AMPD3Q01432 767 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 SNRNP35Q16560 246 aaKnown RBP11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 NAIF1Q69YI7 327 aaPredicted RBP11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 RHBDF2Q6PJF5 856 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 ZNF276Q8N554 614 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 KDF1Q8NAX2 398 aaPredicted RBP11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 PDZD8Q8NEN9 1154 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 MYLPFQ96A32 169 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 ZFRQ96KR1 1074 aaKnown RBP11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 USP28Q96RU2 1077 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 RNF38Q9H0F5 515 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 AGPAT3Q9NRZ7 376 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 TMEM30AQ9NV96 361 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 STARD13Q9Y3M8 1113 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 NME7Q9Y5B8 376 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 PVALEFA0A1B0GWK0 134 aa11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 CDX4O14627 284 aaPredicted RBP11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 HOXC11O43248 304 aaPredicted RBP11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 ATP2C2O75185 946 aa11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 RTN3O95197 1032 aaPredicted RBP11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 CST3P01034 146 aaPredicted RBP11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 IDEP14735 1019 aa11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 PTPN1P18031 435 aaKnown RBP11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 BDNFP23560 247 aa11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 P2RY2P41231 377 aa11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 GRIA2P42262 883 aa11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 PXNP49023 591 aaPredicted RBP11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 DHCR24Q15392 516 aa11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 CCDC142Q17RM4 750 aa11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 PREPLQ4J6C6 727 aaPredicted RBP11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 RNF43Q68DV7 783 aa11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 SLC9A9Q8IVB4 645 aa11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 ETFBKMTQ8IXQ9 262 aa11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 IL17RCQ8NAC3 791 aa11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 TSTD1Q8NFU3 115 aa11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 SLITRK1Q96PX8 696 aa11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 HHIPQ96QV1 700 aa11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 CGRRF1Q99675 332 aa11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 TMEM121BQ9BXQ6 578 aaPredicted RBP11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 CD248Q9HCU0 757 aa11.95□□□□□ -0.5
CLSTN3-206ENST00000535668 DMXL2Q8TDJ6 3036 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 VPS37CA5D8V6 355 aaPredicted RBP11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 FAM221BA6H8Z2 402 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 GOLGA8IPA6NC78 632 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 GOLGA8JA6NMD2 632 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 F8VP50 259 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 HCRTO43612 131 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 YEATS4O95619 227 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 ADH1CP00326 375 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 PROS1P07225 676 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 KRT19P08727 400 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 ANXA13P27216 316 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 GRIK1P39086 918 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 ENPEPQ07075 957 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 CYP24A1Q07973 514 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 BYSLQ13895 437 aaKnown RBP11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 DAB2IPQ5VWQ8 1189 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 KLHDC10Q6PID8 442 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 SCN4BQ8IWT1 228 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 NUP93Q8N1F7 819 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 IQUBQ8NA54 791 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 XXYLT1Q8NBI6 393 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 GLIS3Q8NEA6 775 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 MDGA1Q8NFP4 955 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 SCFD1Q8WVM8 642 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 PNKPQ96T60 521 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 PCIF1Q9H4Z3 704 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 CSNK1G1Q9HCP0 422 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 TRPC7Q9HCX4 862 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 DMAC2Q9NW81 257 aa11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 R3HCC1Q9Y3T6 440 aaKnown RBP11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 DSPP15924 2871 aaKnown RBP11.94□□□□□ -0.5
CLSTN3-206ENST00000535668 THADAQ6YHU6 1953 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 TMEM8BA6NDV4 472 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 KHNYNO15037 678 aaKnown RBP11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 GREM1O60565 184 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 ALDH1A2O94788 518 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 KAT7O95251 611 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 LMAN2Q12907 356 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 TAF10Q12962 218 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 MAP7D1Q3KQU3 841 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 WDR72Q3MJ13 1102 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 FAM26FQ5R3K3 315 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 TDRD10Q5VZ19 366 aaKnown RBP11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 ATL3Q6DD88 541 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 FAM173BQ6P4H8 233 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 SLC23A3Q6PIS1 610 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 PAQR9Q6ZVX9 377 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 UNC13DQ70J99 1090 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 FILIP1Q7Z7B0 1213 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 CRYBG2Q8N1P7 616 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms