RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 ACADSBP45954 432 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 RNASELQ05823 741 aaKnown RBP22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 KLF1Q13351 362 aaPredicted RBP22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 MAP9Q49MG5 647 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 CLEC20AQ6ZU45 233 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 PIGZQ86VD9 579 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 COLGALT2Q8IYK4 626 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 MYCBPAPQ8TBZ2 947 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 PCED1BQ96HM7 432 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 CNPY3Q9BT09 278 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 ASNSD1Q9NWL6 643 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 DSEQ9UL01 958 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 BHMG1C9JSJ3 638 aaPredicted RBP22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 TTI1O43156 1089 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 IL1R2P27930 398 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 PBX3P40426 434 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 SLC8A3P57103 927 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 METTL23Q86XA0 190 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 ABI1Q8IZP0 508 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 CLEC4CQ8WTT0 213 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 MAGOHBQ96A72 148 aaKnown RBP22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 RNF25Q96BH1 459 aaPredicted RBP22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 RBM41Q96IZ5 413 aaKnown RBP22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 SLITRK1Q96PX8 696 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 ACBD6Q9BR61 282 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 FUT8Q9BYC5 575 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 OSBPL8Q9BZF1 889 aa22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 DDX56Q9NY93 547 aaKnown RBP22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 PRG3Q9Y2Y8 225 aaPredicted RBP22.01■■□□□ 1.11
PDXDC1-205ENST00000535621 ATP8B1O43520 1251 aa22■■□□□ 1.11
PDXDC1-205ENST00000535621 RNF8O76064 485 aa22■■□□□ 1.11
PDXDC1-205ENST00000535621 LCP1P13796 627 aa22■■□□□ 1.11
PDXDC1-205ENST00000535621 DEFB103AP81534 67 aa22■■□□□ 1.11
PDXDC1-205ENST00000535621 IKBKEQ14164 716 aa22■■□□□ 1.11
PDXDC1-205ENST00000535621 FAM117BQ6P1L5 589 aa22■■□□□ 1.11
PDXDC1-205ENST00000535621 SLC26A9Q7LBE3 791 aa22■■□□□ 1.11
PDXDC1-205ENST00000535621 C12orf50Q8NA57 414 aaPredicted RBP22■■□□□ 1.11
PDXDC1-205ENST00000535621 MED10Q9BTT4 135 aa22■■□□□ 1.11
PDXDC1-205ENST00000535621 HEMGNQ9BXL5 484 aa22■■□□□ 1.11
PDXDC1-205ENST00000535621 KRT82Q9NSB4 513 aa22■■□□□ 1.11
PDXDC1-205ENST00000535621 PCYOX1Q9UHG3 505 aa22■■□□□ 1.11
PDXDC1-205ENST00000535621 VWA8A3KMH1 1905 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 TBKBP1A7MCY6 615 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 PI4K2BG5E9Z4 385 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 KRT1P04264 644 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 PCK1P35558 622 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 SCNN1AP37088 669 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 CARSP49589 748 aaKnown RBP21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 DR1Q01658 176 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 DHX34Q14147 1143 aaKnown RBP21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 SMC1AQ14683 1233 aaKnown RBP21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 TRADDQ15628 312 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 HADHQ16836 314 aaKnown RBP21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 CCDC14Q49A88 953 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 SH3PXD2AQ5TCZ1 1133 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 MFSD5Q6N075 450 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 TTC27Q6P3X3 843 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 AENQ8WTP8 325 aaKnown RBP21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 MAIP1Q8WWC4 291 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 CASKIN2Q8WXE0 1202 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 RAPGEF5Q92565 580 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 ACSF2Q96CM8 615 aaPredicted RBP21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 LRRC19Q9H756 370 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 NRDE2Q9H7Z3 1164 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 TMEM189-UBE2V1I3L0A0 370 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 DPYSL4O14531 572 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 SASH3O75995 380 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 KRT7P08729 469 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 FAM200BP0CF97 657 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 MIPP30301 263 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 OR1G1P47890 313 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 C15orf59Q2T9L4 293 aaPredicted RBP21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 ZFYVE27Q5T4F4 411 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 MFSD7Q6UXD7 560 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 FAM35AQ86V20 835 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 NPAS4Q8IUM7 802 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 KCTD13Q8WZ19 329 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 CFAP57Q96MR6 1250 aa21.99■■□□□ 1.11
PDXDC1-205ENST00000535621 TYMPP19971 482 aa21.98■■□□□ 1.11
PDXDC1-205ENST00000535621 COPS2P61201 443 aa21.98■■□□□ 1.11
PDXDC1-205ENST00000535621 KCTD19Q17RG1 926 aaPredicted RBP21.98■■□□□ 1.11
PDXDC1-205ENST00000535621 SMTNL2Q2TAL5 461 aa21.98■■□□□ 1.11
PDXDC1-205ENST00000535621 KCNT1Q5JUK3 1230 aa21.98■■□□□ 1.11
PDXDC1-205ENST00000535621 OVOS1Q6IE37 1185 aa21.98■■□□□ 1.11
PDXDC1-205ENST00000535621 FAM171BQ6P995 826 aa21.98■■□□□ 1.11
PDXDC1-205ENST00000535621 CCDC137Q6PK04 289 aaKnown RBP21.98■■□□□ 1.11
PDXDC1-205ENST00000535621 ARCQ7LC44 396 aa21.98■■□□□ 1.11
PDXDC1-205ENST00000535621 SEC14L1Q92503 715 aa21.98■■□□□ 1.11
PDXDC1-205ENST00000535621 ZWILCHQ9H900 591 aa21.98■■□□□ 1.11
PDXDC1-205ENST00000535621 USP18Q9UMW8 372 aa21.98■■□□□ 1.11
PDXDC1-205ENST00000535621 ARHGEF37A1IGU5 675 aa21.97■■□□□ 1.11
PDXDC1-205ENST00000535621 RFC2P35250 354 aa21.97■■□□□ 1.11
PDXDC1-205ENST00000535621 COILP38432 576 aaPredicted RBP21.97■■□□□ 1.11
PDXDC1-205ENST00000535621 CETN2P41208 172 aa21.97■■□□□ 1.11
PDXDC1-205ENST00000535621 BCAR1P56945 870 aa21.97■■□□□ 1.11
PDXDC1-205ENST00000535621 MAP3K7CLP57077 242 aa21.97■■□□□ 1.11
PDXDC1-205ENST00000535621 INTS6LQ5JSJ4 861 aaKnown RBP21.97■■□□□ 1.11
PDXDC1-205ENST00000535621 C16orf59Q7L2K0 433 aa21.97■■□□□ 1.11
PDXDC1-205ENST00000535621 C7orf61Q8IZ16 206 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms