RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 LARSQ9P2J5 1176 aaKnown RBP7.02□□□□□ -1.29
USP28-202ENST00000535607 FAM153AQ9UHL3 310 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 INTUQ9ULD6 942 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 USP15Q9Y4E8 981 aaPredicted RBP7.02□□□□□ -1.29
USP28-202ENST00000535607 SLC4A4Q9Y6R1 1079 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 DUSP10Q9Y6W6 482 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 TNKSO95271 1327 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 ZNF646O15015 1829 aaPredicted RBP7.01□□□□□ -1.29
USP28-202ENST00000535607 A0A0A6YYK5 440 aaPredicted RBP7.01□□□□□ -1.29
USP28-202ENST00000535607 FRMD3A2A2Y4 597 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 LRRC53A6NM62 1247 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 H0YGN5 161 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 KCNK3O14649 394 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 RAD51CO43502 376 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 CEP104O60308 925 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 GAS7O60861 476 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 ATP2C2O75185 946 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 PPFIA2O75334 1257 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 MBD4O95243 580 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 IL1R1P14778 569 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 CASP1P29466 404 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 PCK1P35558 622 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 GCLCP48506 637 aaPredicted RBP7.01□□□□□ -1.29
USP28-202ENST00000535607 PAPOLAP51003 745 aaKnown RBP7.01□□□□□ -1.29
USP28-202ENST00000535607 NPEPPSP55786 919 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 MVKQ03426 396 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 PPARAQ07869 468 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 CCDC15Q0P6D6 951 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 DHX34Q14147 1143 aaKnown RBP7.01□□□□□ -1.29
USP28-202ENST00000535607 ASIC2Q16515 512 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 PFKFB3Q16875 520 aaPredicted RBP7.01□□□□□ -1.29
USP28-202ENST00000535607 TMEM266Q2M3C6 531 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 SH2D4BQ5SQS7 431 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 ADGRF1Q5T601 910 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 ANKRD40Q6AI12 368 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 MPZL3Q6UWV2 235 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 PIK3AP1Q6ZUJ8 805 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 TMTC3Q6ZXV5 915 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 ATG4DQ86TL0 474 aaPredicted RBP7.01□□□□□ -1.29
USP28-202ENST00000535607 NLRX1Q86UT6 975 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 FAM228AQ86W67 206 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 BLIDQ8IZY5 108 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 GUF1Q8N442 669 aaKnown RBP7.01□□□□□ -1.29
USP28-202ENST00000535607 WDR66Q8TBY9 1149 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 SCFD2Q8WU76 684 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 ATXN2LQ8WWM7 1075 aaKnown RBP7.01□□□□□ -1.29
USP28-202ENST00000535607 DDX1Q92499 740 aaKnown RBP7.01□□□□□ -1.29
USP28-202ENST00000535607 STAMQ92783 540 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 TLCD1Q96CP7 247 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 STAMBPL1Q96FJ0 436 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 THOC1Q96FV9 657 aaKnown RBP7.01□□□□□ -1.29
USP28-202ENST00000535607 BICD1Q96G01 975 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 SCLYQ96I15 445 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 CDK5RAP3Q96JB5 506 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 INPP4AQ96PE3 977 aaPredicted RBP7.01□□□□□ -1.29
USP28-202ENST00000535607 FMO2Q99518 471 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 SELENOSQ9BQE4 189 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 LZTS2Q9BRK4 669 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.01□□□□□ -1.29
USP28-202ENST00000535607 TMEM109Q9BVC6 243 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 JAM3Q9BX67 310 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 SPZ1Q9BXG8 430 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 ROPN1BQ9BZX4 212 aaPredicted RBP7.01□□□□□ -1.29
USP28-202ENST00000535607 ROPN1Q9HAT0 212 aaPredicted RBP7.01□□□□□ -1.29
USP28-202ENST00000535607 FAM207AQ9NSI2 230 aaPredicted RBP7.01□□□□□ -1.29
USP28-202ENST00000535607 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.01□□□□□ -1.29
USP28-202ENST00000535607 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.01□□□□□ -1.29
USP28-202ENST00000535607 SUCLA2Q9P2R7 463 aaPredicted RBP7.01□□□□□ -1.29
USP28-202ENST00000535607 POLLQ9UGP5 575 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 FBXL5Q9UKA1 691 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 ARL2BPQ9Y2Y0 163 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 DAAM1Q9Y4D1 1078 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 NFS1Q9Y697 457 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 MYH1P12882 1939 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 MYO3BQ8WXR4 1341 aa7.01□□□□□ -1.29
USP28-202ENST00000535607 TCRBV5S4A2TA0A5A2 114 aa7□□□□□ -1.29
USP28-202ENST00000535607 TRIM49BA6NDI0 452 aa7□□□□□ -1.29
USP28-202ENST00000535607 F8VZ95 297 aa7□□□□□ -1.29
USP28-202ENST00000535607 PODXLO00592 558 aa7□□□□□ -1.29
USP28-202ENST00000535607 ZNF263O14978 683 aa7□□□□□ -1.29
USP28-202ENST00000535607 SLC26A4O43511 780 aa7□□□□□ -1.29
USP28-202ENST00000535607 NCK2O43639 380 aa7□□□□□ -1.29
USP28-202ENST00000535607 BUB1O43683 1085 aa7□□□□□ -1.29
USP28-202ENST00000535607 DIAPH2O60879 1101 aa7□□□□□ -1.29
USP28-202ENST00000535607 ADAMTS4O75173 837 aa7□□□□□ -1.29
USP28-202ENST00000535607 ALDH3A1P30838 453 aa7□□□□□ -1.29
USP28-202ENST00000535607 STAT3P40763 770 aa7□□□□□ -1.29
USP28-202ENST00000535607 PEX19P40855 299 aa7□□□□□ -1.29
USP28-202ENST00000535607 MMP13P45452 471 aa7□□□□□ -1.29
USP28-202ENST00000535607 GYG1P46976 350 aa7□□□□□ -1.29
USP28-202ENST00000535607 SCNN1BP51168 640 aa7□□□□□ -1.29
USP28-202ENST00000535607 DRG2P55039 364 aaKnown RBP7□□□□□ -1.29
USP28-202ENST00000535607 FKBP1AP62942 108 aaKnown RBP7□□□□□ -1.29
USP28-202ENST00000535607 IGBP1P78318 339 aa7□□□□□ -1.29
USP28-202ENST00000535607 KLHL30Q0D2K2 578 aa7□□□□□ -1.29
USP28-202ENST00000535607 ZNF460Q14592 562 aa7□□□□□ -1.29
USP28-202ENST00000535607 SGSM1Q2NKQ1 1148 aa7□□□□□ -1.29
USP28-202ENST00000535607 PARP6Q2NL67 630 aa7□□□□□ -1.29
USP28-202ENST00000535607 ASTE1Q2TB18 679 aaPredicted RBP7□□□□□ -1.29
USP28-202ENST00000535607 MIIPQ5JXC2 388 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms