RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 SMPD4Q9NXE4 827 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 CPQQ9Y646 472 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 ZNF638Q14966 1978 aaKnown RBP14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 ZNF840PA6NDX5 716 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 MAP3K13O43283 966 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 EPN2O95208 641 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 RPL13P26373 211 aaKnown RBP14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 SEC13P55735 322 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 MYL6P60660 151 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 SLC7A9P82251 487 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 MRPS21P82921 87 aaKnown RBP14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 CREB5Q02930 508 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 BMT2Q1RMZ1 405 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 HSF5Q4G112 596 aaPredicted RBP14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 C2orf27AQ580R0 203 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 EOGTQ5NDL2 527 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 HECTD3Q5T447 861 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 CEP135Q66GS9 1140 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 SDE2Q6IQ49 451 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 EPM2AIP1Q7L775 607 aaPredicted RBP14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 TADA2BQ86TJ2 420 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 PGBD3Q8N328 593 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 TAF4BQ92750 862 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 CHFRQ96EP1 664 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 PNKPQ96T60 521 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 TTLL2Q9BWV7 592 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 COMMD8Q9NX08 183 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 GCNT4Q9P109 453 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 CFAP97Q9P2B7 532 aa14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 LSM7Q9UK45 103 aaKnown RBP14.07□□□□□ -0.16
CLSTN3-205ENST00000535452 OTOGLQ3ZCN5 2332 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 TGFB1I1O43294 461 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 HCRTO43612 131 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 TADA3O75528 432 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 CST3P01034 146 aaPredicted RBP14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 SLFN14P0C7P3 912 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 ZNF806P0C7X5 589 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 MPLP40238 635 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 EIF2DP41214 584 aaKnown RBP14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 PIK3CAP42336 1068 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 DPP6P42658 865 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 KRT85P78386 507 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 GAD2Q05329 585 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 DAB2IPQ5VWQ8 1189 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 RESP18Q5W5W9 173 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 SCARA5Q6ZMJ2 495 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 FILIP1Q7Z7B0 1213 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 KBTBD6Q86V97 674 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 GLIS3Q8NEA6 775 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 CXorf38Q8TB03 319 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 FAM84AQ96KN4 292 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 SPATA32Q96LK8 384 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 SLC22A12Q96S37 553 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 TLR8Q9NR97 1041 aaKnown RBP14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 EBF1Q9UH73 591 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 PCDHA7Q9UN72 937 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 PTPRJQ12913 1337 aa14.06□□□□□ -0.16
CLSTN3-205ENST00000535452 ADH5P11766 374 aa14.05□□□□□ -0.16
CLSTN3-205ENST00000535452 SLC8A3P57103 927 aa14.05□□□□□ -0.16
CLSTN3-205ENST00000535452 CUL4BQ13620 913 aa14.05□□□□□ -0.16
CLSTN3-205ENST00000535452 ANO4Q32M45 955 aa14.05□□□□□ -0.16
CLSTN3-205ENST00000535452 RNF43Q68DV7 783 aa14.05□□□□□ -0.16
CLSTN3-205ENST00000535452 ANO7Q6IWH7 933 aa14.05□□□□□ -0.16
CLSTN3-205ENST00000535452 WHAMMQ8TF30 809 aa14.05□□□□□ -0.16
CLSTN3-205ENST00000535452 ZC3H10Q96K80 434 aaKnown RBP14.05□□□□□ -0.16
CLSTN3-205ENST00000535452 ZNF518BQ9C0D4 1074 aa14.05□□□□□ -0.16
CLSTN3-205ENST00000535452 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.05□□□□□ -0.16
CLSTN3-205ENST00000535452 ARHGEF4Q9NR80 690 aa14.05□□□□□ -0.16
CLSTN3-205ENST00000535452 KRT82Q9NSB4 513 aa14.05□□□□□ -0.16
CLSTN3-205ENST00000535452 E2F8A0AVK6 867 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 TBC1D3BA6NDS4 549 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 OTOL1A6NHN0 477 aaPredicted RBP14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 PDXKO00764 312 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 KHNYNO15037 678 aaKnown RBP14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 AP1G2O75843 785 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 CAVIN2O95810 425 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 NR3C1P04150 777 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 GRIA2P42262 883 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 TUBP50607 506 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 LIMK1P53667 647 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 E2F5Q15329 346 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 DHCR24Q15392 516 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 CYP2U1Q7Z449 544 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 LIMS2Q7Z4I7 341 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 FAM35AQ86V20 835 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 UNC93AQ86WB7 457 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 SPRYD3Q8NCJ5 442 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 XPO6Q96QU8 1125 aaKnown RBP14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 LINC00597Q9H2U6 94 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 VRTNQ9H8Y1 702 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 DEC1Q9P2X7 70 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 SERTAD1Q9UHV2 236 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 MMP17Q9ULZ9 603 aa14.04□□□□□ -0.16
CLSTN3-205ENST00000535452 IKBKBO14920 756 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 STX10O60499 249 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 KAT7O95251 611 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 ADRB1P08588 477 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 FAM200BP0CF97 657 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 TGM1P22735 817 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 SYKP43405 635 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms