RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 PRAMEF12O95522 483 aa24.02■■□□□ 1.44
SFSWAP-204ENST00000535399 CALCAP01258 141 aa24.02■■□□□ 1.44
SFSWAP-204ENST00000535399 KRT5P13647 590 aa24.02■■□□□ 1.44
SFSWAP-204ENST00000535399 PPP3CCP48454 512 aa24.02■■□□□ 1.44
SFSWAP-204ENST00000535399 GPC5P78333 572 aa24.02■■□□□ 1.44
SFSWAP-204ENST00000535399 IFRD2Q12894 506 aaPredicted RBP24.02■■□□□ 1.44
SFSWAP-204ENST00000535399 IQCB1Q15051 598 aa24.02■■□□□ 1.44
SFSWAP-204ENST00000535399 NFKBIBQ15653 356 aa24.02■■□□□ 1.44
SFSWAP-204ENST00000535399 VITQ6UXI7 678 aa24.02■■□□□ 1.44
SFSWAP-204ENST00000535399 CMTM8Q8IZV2 173 aa24.02■■□□□ 1.44
SFSWAP-204ENST00000535399 SHC3Q92529 594 aa24.02■■□□□ 1.44
SFSWAP-204ENST00000535399 FBXO32Q969P5 355 aa24.02■■□□□ 1.44
SFSWAP-204ENST00000535399 ASIC4Q96FT7 647 aa24.02■■□□□ 1.44
SFSWAP-204ENST00000535399 TECTAO75443 2155 aa24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 C2orf78A6NCI8 922 aa24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 FAM86C2PA6NEL3 165 aa24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 SMTNL1A8MU46 457 aa24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 BECN2A8MW95 431 aa24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 TPM2P07951 284 aa24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 ATP1A3P13637 1013 aa24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 BRD2P25440 801 aaKnown RBP24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 ARHGAP44Q17R89 818 aa24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 LCLAT1Q6UWP7 414 aa24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 ANKRD20A12PQ8NF67 263 aa24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 OVCA2Q8WZ82 227 aa24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 E2F7Q96AV8 911 aa24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 LRRC3BQ96PB8 259 aa24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 SLITRK1Q96PX8 696 aa24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 SLC22A12Q96S37 553 aa24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 LSM14BQ9BX40 385 aaKnown RBP24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 UBXN6Q9BZV1 441 aa24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 SMG9Q9H0W8 520 aaKnown RBP24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 SLC2A4RGQ9NR83 387 aa24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 DNAJC12Q9UKB3 198 aa24.01■■□□□ 1.43
SFSWAP-204ENST00000535399 TMEM221A6NGB7 291 aa24■■□□□ 1.43
SFSWAP-204ENST00000535399 LGALS16A8MUM7 142 aa24■■□□□ 1.43
SFSWAP-204ENST00000535399 M0R296 226 aa24■■□□□ 1.43
SFSWAP-204ENST00000535399 CDK11BP21127 795 aaKnown RBP24■■□□□ 1.43
SFSWAP-204ENST00000535399 KIF11P52732 1056 aa24■■□□□ 1.43
SFSWAP-204ENST00000535399 BCAT1P54687 386 aa24■■□□□ 1.43
SFSWAP-204ENST00000535399 CNGA2Q16280 664 aa24■■□□□ 1.43
SFSWAP-204ENST00000535399 PKDCCQ504Y2 493 aa24■■□□□ 1.43
SFSWAP-204ENST00000535399 KLHDC7AQ5VTJ3 777 aa24■■□□□ 1.43
SFSWAP-204ENST00000535399 SMYD5Q6GMV2 418 aa24■■□□□ 1.43
SFSWAP-204ENST00000535399 C1QTNF1Q9BXJ1 281 aa24■■□□□ 1.43
SFSWAP-204ENST00000535399 FBXO44Q9H4M3 255 aa24■■□□□ 1.43
SFSWAP-204ENST00000535399 TRPC7Q9HCX4 862 aa24■■□□□ 1.43
SFSWAP-204ENST00000535399 OBP2AQ9NY56 170 aa24■■□□□ 1.43
SFSWAP-204ENST00000535399 GMIPQ9P107 970 aa24■■□□□ 1.43
SFSWAP-204ENST00000535399 WDR3Q9UNX4 943 aaKnown RBP eCLIP24■■□□□ 1.43
SFSWAP-204ENST00000535399 GREB1Q4ZG55 1949 aa24■■□□□ 1.43
SFSWAP-204ENST00000535399 TRAV19A0A0A6YYK7 116 aa23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 GPR37L1O60883 481 aa23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 ZDHHC11BP0C7U3 371 aa23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 AVPR1AP37288 418 aa23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 PDE4CQ08493 712 aa23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 GRM2Q14416 872 aa23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 SNX30Q5VWJ9 437 aa23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 PIGZQ86VD9 579 aa23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 MFSD6LQ8IWD5 586 aa23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 ARL14EPQ8N8R7 260 aaPredicted RBP23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 PDZD8Q8NEN9 1154 aa23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 UBA3Q8TBC4 463 aa23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 DEPDC1BQ8WUY9 529 aa23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 USP13Q92995 863 aaPredicted RBP23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 CYP2S1Q96SQ9 504 aa23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 CBX8Q9HC52 389 aa23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 HESX1Q9UBX0 185 aa23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 CHORDC1Q9UHD1 332 aaPredicted RBP23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 SCML2Q9UQR0 700 aa23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 FHOD1Q9Y613 1164 aa23.99■■□□□ 1.43
SFSWAP-204ENST00000535399 TULP2O00295 520 aa23.98■■□□□ 1.43
SFSWAP-204ENST00000535399 XPO1O14980 1071 aaKnown RBP23.98■■□□□ 1.43
SFSWAP-204ENST00000535399 CFHP08603 1231 aa23.98■■□□□ 1.43
SFSWAP-204ENST00000535399 PFKLP17858 780 aa23.98■■□□□ 1.43
SFSWAP-204ENST00000535399 PSMC3P17980 439 aa23.98■■□□□ 1.43
SFSWAP-204ENST00000535399 PGFP49763 221 aa23.98■■□□□ 1.43
SFSWAP-204ENST00000535399 BST2Q10589 180 aaKnown RBP23.98■■□□□ 1.43
SFSWAP-204ENST00000535399 STILQ15468 1287 aa23.98■■□□□ 1.43
SFSWAP-204ENST00000535399 FKBP15Q5T1M5 1219 aa23.98■■□□□ 1.43
SFSWAP-204ENST00000535399 TRMT61BQ9BVS5 477 aaKnown RBP23.98■■□□□ 1.43
SFSWAP-204ENST00000535399 NAA15Q9BXJ9 866 aaKnown RBP23.98■■□□□ 1.43
SFSWAP-204ENST00000535399 PLCB1Q9NQ66 1216 aa23.98■■□□□ 1.43
SFSWAP-204ENST00000535399 TDP1Q9NUW8 608 aa23.98■■□□□ 1.43
SFSWAP-204ENST00000535399 CCL26Q9Y258 94 aa23.98■■□□□ 1.43
SFSWAP-204ENST00000535399 SIK3Q9Y2K2 1263 aa23.98■■□□□ 1.43
SFSWAP-204ENST00000535399 USP3Q9Y6I4 520 aa23.98■■□□□ 1.43
SFSWAP-204ENST00000535399 DPYSL4O14531 572 aa23.97■■□□□ 1.43
SFSWAP-204ENST00000535399 ABL1P00519 1130 aa23.97■■□□□ 1.43
SFSWAP-204ENST00000535399 OAS1P00973 400 aaKnown RBP23.97■■□□□ 1.43
SFSWAP-204ENST00000535399 UCHL3P15374 230 aa23.97■■□□□ 1.43
SFSWAP-204ENST00000535399 HDCP19113 662 aa23.97■■□□□ 1.43
SFSWAP-204ENST00000535399 KLK7P49862 253 aa23.97■■□□□ 1.43
SFSWAP-204ENST00000535399 SLC8A3P57103 927 aa23.97■■□□□ 1.43
SFSWAP-204ENST00000535399 ZNF268Q14587 947 aaPredicted RBP23.97■■□□□ 1.43
SFSWAP-204ENST00000535399 RAB41Q5JT25 222 aa23.97■■□□□ 1.43
SFSWAP-204ENST00000535399 TMEM31Q5JXX7 168 aa23.97■■□□□ 1.43
SFSWAP-204ENST00000535399 CELF5Q8N6W0 485 aaKnown RBP23.97■■□□□ 1.43
SFSWAP-204ENST00000535399 GANQ9H2C0 597 aa23.97■■□□□ 1.43
SFSWAP-204ENST00000535399 ACP6Q9NPH0 428 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms