RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 CERKQ8TCT0 537 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 CBWD1Q9BRT8 395 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 APPL1Q9UKG1 709 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 MED14O60244 1454 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 MYO3AQ8NEV4 1616 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 B3GAT3O94766 335 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 DSG3P32926 999 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 KCNK10P57789 538 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 PDK1Q15118 436 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 ADGRA1Q86SQ6 560 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 EPS8L3Q8TE67 593 aaKnown RBP13.07□□□□□ -0.32
SPG11-203ENST00000535302 SPRTNQ9H040 489 aaPredicted RBP13.07□□□□□ -0.32
SPG11-203ENST00000535302 SPATA2Q9UM82 520 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 JCADQ9P266 1359 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 SPHKAPQ2M3C7 1700 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 CYP2C19P33261 490 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 ZC3H15Q8WU90 426 aaKnown RBP13.07□□□□□ -0.32
SPG11-203ENST00000535302 TSPAN17Q96FV3 270 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 PCDHGA4Q9Y5G9 962 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 DYTNA2CJ06 578 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 FOXN3O00409 490 aaPredicted RBP13.07□□□□□ -0.32
SPG11-203ENST00000535302 TBX3O15119 743 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 SLC25A27O95847 323 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 COILP38432 576 aaPredicted RBP13.07□□□□□ -0.32
SPG11-203ENST00000535302 CCNI2Q6ZMN8 369 aaPredicted RBP13.07□□□□□ -0.32
SPG11-203ENST00000535302 SCFD2Q8WU76 684 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 CCT8L2Q96SF2 557 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 PRMT7Q9NVM4 692 aaPredicted RBP13.07□□□□□ -0.32
SPG11-203ENST00000535302 C1orf167Q5SNV9 1468 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 RGL2O15211 777 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 ZNF682O95780 498 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 SLC29A2Q14542 456 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 PDIA6Q15084 440 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 CNGA2Q16280 664 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 PHKG1Q16816 387 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 CYP51A1Q16850 503 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 CROCC2H7BZ55 1655 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 IQSEC2Q5JU85 1478 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 ODC1P11926 461 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 HPGDP15428 266 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 PON1P27169 355 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 TRIM28Q13263 835 aaKnown RBP13.07□□□□□ -0.32
SPG11-203ENST00000535302 TRIM71Q2Q1W2 868 aaKnown RBP13.07□□□□□ -0.32
SPG11-203ENST00000535302 SRLQ86TD4 932 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 ANKRD13AQ8IZ07 590 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 OLFM3Q96PB7 478 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 HDHD2Q9H0R4 259 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 SCN3BQ9NY72 215 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 CYB561D2O14569 222 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 RALBP11234 206 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 FCGRTP55899 365 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 YWHAZP63104 245 aaKnown RBP13.06□□□□□ -0.32
SPG11-203ENST00000535302 TP53BP2Q13625 1128 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 STILQ15468 1287 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 TXNRD3Q86VQ6 643 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 PHACTR4Q8IZ21 702 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.06□□□□□ -0.32
SPG11-203ENST00000535302 CHST13Q8NET6 341 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 TRPC4APQ8TEL6 797 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 REXO4Q9GZR2 422 aaKnown RBP13.06□□□□□ -0.32
SPG11-203ENST00000535302 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.06□□□□□ -0.32
SPG11-203ENST00000535302 TDRKHQ9Y2W6 561 aaKnown RBP13.06□□□□□ -0.32
SPG11-203ENST00000535302 TMEM150BA6NC51 233 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 KIAA0391O15091 583 aaKnown RBP13.06□□□□□ -0.32
SPG11-203ENST00000535302 CLASP2O75122 1294 aaKnown RBP13.06□□□□□ -0.32
SPG11-203ENST00000535302 KATNA1O75449 491 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 PCSK1P29120 753 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 CLK2P49760 499 aaKnown RBP13.06□□□□□ -0.32
SPG11-203ENST00000535302 EFEMP1Q12805 493 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 SEC16BQ96JE7 1060 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 FAM111AQ96PZ2 611 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 MANSC1Q9H8J5 431 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 PAK5Q9P286 719 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 ABCA6Q8N139 1617 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 EIF3DO15371 548 aaKnown RBP eCLIP13.06□□□□□ -0.32
SPG11-203ENST00000535302 PPP1R37O75864 691 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 ASS1P00966 412 aaKnown RBP13.06□□□□□ -0.32
SPG11-203ENST00000535302 RFX5P48382 616 aaPredicted RBP13.06□□□□□ -0.32
SPG11-203ENST00000535302 C11orf88Q6PI97 169 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 SYDE1Q6ZW31 735 aaPredicted RBP13.06□□□□□ -0.32
SPG11-203ENST00000535302 OOSP2Q86WS3 158 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 COL23A1Q86Y22 540 aaPredicted RBP13.06□□□□□ -0.32
SPG11-203ENST00000535302 GPR75-ASB3A0A0A6YYF3 556 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 HEATR9A2RTY3 570 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 USP1O94782 785 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 ICAM1P05362 532 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 FXR2P51116 673 aaKnown RBP eCLIP13.06□□□□□ -0.325e-7■■□□□ 11.7
SPG11-203ENST00000535302 STARD3Q14849 445 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 ANKS6Q68DC2 871 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 EMC1Q8N766 993 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 USP38Q8NB14 1042 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 RANBP17Q9H2T7 1088 aaKnown RBP13.06□□□□□ -0.32
SPG11-203ENST00000535302 RSAD1Q9HA92 442 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 IARS2Q9NSE4 1012 aaKnown RBP13.06□□□□□ -0.32
SPG11-203ENST00000535302 TRIM66O15016 1216 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 POMCP01189 267 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 ZCCHC18P0CG32 403 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 SPRP35270 261 aaPredicted RBP13.06□□□□□ -0.32
SPG11-203ENST00000535302 NBPF12Q5TAG4 269 aaPredicted RBP13.06□□□□□ -0.32
SPG11-203ENST00000535302 INTS5Q6P9B9 1019 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms