RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 P4HA1P13674 534 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 HDCP19113 662 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 NR2F2P24468 414 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 PIK3CAP42336 1068 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 CXCL12P48061 93 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 IFNAR2P48551 515 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 PDE6CP51160 858 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 CACNA2D1P54289 1103 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 NRLP54845 237 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 CLDN10P78369 228 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 CCINQ13939 588 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 PDGFRLQ15198 375 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 ZNF77Q15935 545 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 KIAA2013Q8IYS2 634 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 SPEM1Q8N4L4 309 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 CPA6Q8N4T0 437 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 DCLK2Q8N568 766 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 SUMF1Q8NBK3 374 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 GPT2Q8TD30 523 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 TMC2Q8TDI7 906 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 SH3RF2Q8TEC5 729 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 OSCP1Q8WVF1 389 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 RUBCNQ92622 972 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 NELL1Q92832 810 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 C8orf48Q96LL4 319 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 CEP295NLQ96MC4 621 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 B3GNT5Q9BYG0 378 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 FAM126AQ9BYI3 521 aaPredicted RBP9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 SDCBP2Q9H190 292 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 MMRN2Q9H8L6 949 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 VRTNQ9H8Y1 702 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.08□□□□□ -0.966e-6■■■■■ 48.1
SFSWAP-202ENST00000535202 DUS2Q9NX74 493 aaKnown RBP9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 EHD2Q9NZN4 543 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 TRPM5Q9NZQ8 1165 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 GCNT4Q9P109 453 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 NCDNQ9UBB6 729 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 SMG5Q9UPR3 1016 aaKnown RBP9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 TRAF3IP3Q9Y228 551 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 WNT6Q9Y6F9 365 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 MYH10P35580 1976 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 ZFHX2Q9C0A1 2572 aaPredicted RBP9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 VGLL3A8MV65 326 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 TRIM49P0CI25 452 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 TRIM49CP0CI26 452 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 KRT13P13646 458 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 VAMP7P51809 220 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 NOP14P78316 857 aaKnown RBP9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 AMPD2Q01433 879 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 DMWDQ09019 674 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 GRSF1Q12849 480 aaKnown RBP eCLIP9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 TAF10Q12962 218 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 ORC1Q13415 861 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 SGSM1Q2NKQ1 1148 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 ZACNQ401N2 412 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 HEATR6Q6AI08 1181 aaKnown RBP9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 SPOPLQ6IQ16 392 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 FSTL4Q6MZW2 842 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 MAMSTRQ6ZN01 415 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 SV2AQ7L0J3 742 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 ACOT1Q86TX2 421 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 FAM35AQ86V20 835 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 FAM186BQ8IYM0 893 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 SYNPOQ8N3V7 929 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 KIF18AQ8NI77 898 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 TMEM174Q8WUU8 243 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 CHFRQ96EP1 664 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 CCDC34Q96HJ3 373 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 TNIP3Q96KP6 325 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 SLITRK1Q96PX8 696 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 TTLL2Q9BWV7 592 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 EPC1Q9H2F5 836 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 ECT2Q9H8V3 914 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 TMEM30AQ9NV96 361 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 ARHGAP26Q9UNA1 814 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 FAM186AA6NE01 2351 aa9.07□□□□□ -0.96
SFSWAP-202ENST00000535202 MYO16Q9Y6X6 1858 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 ATG2BQ96BY7 2078 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 ZNF840PA6NDX5 716 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 GOLGA6L4A6NEF3 574 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 CHURC1-FNTBB4DL54 471 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 LEFTY2O00292 366 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 TRDMT1O14717 391 aaKnown RBP9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 RIOK3O14730 519 aaKnown RBP9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 IKBKBO14920 756 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 MAPK13O15264 365 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 AKAP3O75969 853 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 RTN3O95197 1032 aaPredicted RBP9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 EGFP01133 1207 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 HLA-DRAP01903 254 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 MBL2P11226 248 aaPredicted RBP9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 CCDC130P13994 396 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 PFKLP17858 780 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 RPL13P26373 211 aaKnown RBP9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 YWHAQP27348 245 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 GJA4P35212 333 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 ID4P47928 161 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 PPP3CCP48454 512 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 GCLMP48507 274 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 FNTBP49356 437 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms