RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	PCMTD2	Q9NV79	361 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	FZD1	Q9UP38	647 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	GMNC	A6NCL1	334 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	AGT	P01019	485 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TAS1R2	Q8TE23	839 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CCDC85C	A6NKD9	419 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PNMA6A	P0CW24	399 aa	Predicted RBP	16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ALOX15	P16050	662 aa	Predicted RBP	16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TBX4	P57082	545 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CREM	Q03060	361 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	MFSD4B	Q5TF39	518 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TRAPPC12	Q8WVT3	735 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SLC5A5	Q92911	643 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	DMAP1	Q9NPF5	467 aa	Predicted RBP	16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PDGFC	Q9NRA1	345 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	KBTBD4	Q9NVX7	518 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	AP4E1	Q9UPM8	1137 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	MRFAP1	Q9Y605	127 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	GRK3	P35626	688 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SERPINB4	P48594	390 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	FAM131B	Q86XD5	332 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	JAML	Q86YT9	394 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	IL17RB	Q9NRM6	502 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	MED21	Q13503	144 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ANKS1A	Q92625	1134 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	MS4A14	Q96JA4	679 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	FAM118B	Q9BPY3	351 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	DCLK3	Q9C098	648 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CLPB	Q9H078	707 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	RANBP17	Q9H2T7	1088 aa	Known RBP	16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SPAST	Q9UBP0	616 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CAPN15	O75808	1086 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TGM2	P21980	687 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	RFWD2	Q8NHY2	731 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	LRRC1	Q9BTT6	524 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	FTHL17	Q9BXU8	183 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	COPS7B	Q9H9Q2	264 aa	Predicted RBP	16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ALG13	Q9NP73	1137 aa	Known RBP	16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	INTS13	Q9NVM9	706 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	GRID1	Q9ULK0	1009 aa		16.31	■□□□□ 0.2
NCAPD3-213	ENST00000534532	APOA4	P06727	396 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	MAGEA4	P43358	317 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SV2A	Q7L0J3	742 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	C11orf96	Q7Z7L8	435 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	HES6	Q96HZ4	224 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	POP1	Q99575	1024 aa	Known RBP	16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	MAN1C1	Q9NR34	630 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	GZMA	P12544	262 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SOX10	P56693	466 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	GPR142	Q7Z601	462 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SERPINB11	Q96P15	392 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	WDR18	Q9BV38	432 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	THAP2	Q9H0W7	228 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SCOC	Q9UIL1	159 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SNCAIP	Q9Y6H5	919 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	EEF1D	P29692	281 aa	Known RBP	16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CASP7	P55210	303 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CELF3	Q5SZQ8	465 aa	Known RBP	16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	FAM198A	Q9UFP1	575 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CARS	P49589	748 aa	Known RBP	16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CUL3	Q13618	768 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PLCL1	Q15111	1095 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CLEC16A	Q2KHT3	1053 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SGO1	Q5FBB7	561 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PGLYRP2	Q96PD5	576 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SCHIP1	Q9P0W5	487 aa	Predicted RBP	16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TRAF3IP3	Q9Y228	551 aa		16.3	■□□□□ 0.2
NCAPD3-213	ENST00000534532	GAK	O14976	1311 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	NCAM2	O15394	837 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TBC1D12	O60347	775 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PRKAR2A	P13861	404 aa	Known RBP	16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TTC39B	Q5VTQ0	682 aa	Predicted RBP	16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ZFPM1	Q8IX07	1006 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	HOMEZ	Q8IX15	550 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	FIBCD1	Q8N539	461 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SMPD4	Q9NXE4	827 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ARHGAP26	Q9UNA1	814 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	FAM50B	Q9Y247	325 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	DRG1	Q9Y295	367 aa	Known RBP	16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	KLK7	P49862	253 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	OTOP1	Q7RTM1	612 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TMEM86A	Q8N2M4	240 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TSEN34	Q9BSV6	310 aa	Known RBP	16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TMEM161A	Q9NX61	479 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	UTP6	Q9NYH9	597 aa	Known RBP	16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ADGRA2	Q96PE1	1338 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PGK1	P00558	417 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	OTULIN	Q96BN8	352 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	EIF2A	Q9BY44	585 aa	Known RBP	16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SLC9A3R1	O14745	358 aa	Predicted RBP	16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ZDHHC17	Q8IUH5	632 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SLC20A1	Q8WUM9	679 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ARL8A	Q96BM9	186 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ACSF2	Q96CM8	615 aa	Predicted RBP	16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CARD9	Q9H257	536 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	OSGEPL1	Q9H4B0	414 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ECT2	Q9H8V3	914 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PXDN	Q92626	1479 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	UBA1	P22314	1058 aa	Known RBP	16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ACAT1	P24752	427 aa	Known RBP	16.29	■□□□□ 0.2

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms