RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 CCNIQ14094 377 aa4.82□□□□□ -1.64
ATPAF1-211ENST00000534216 ARHGEF7Q14155 803 aa4.82□□□□□ -1.64
ATPAF1-211ENST00000534216 CYP1B1Q16678 543 aa4.82□□□□□ -1.64
ATPAF1-211ENST00000534216 COLEC12Q5KU26 742 aa4.82□□□□□ -1.64
ATPAF1-211ENST00000534216 CACHD1Q5VU97 1274 aa4.82□□□□□ -1.64
ATPAF1-211ENST00000534216 FCRL6Q6DN72 434 aa4.82□□□□□ -1.64
ATPAF1-211ENST00000534216 ZNF804AQ7Z570 1209 aa4.82□□□□□ -1.64
ATPAF1-211ENST00000534216 FANCBQ8NB91 859 aa4.82□□□□□ -1.64
ATPAF1-211ENST00000534216 HASPINQ8TF76 798 aa4.82□□□□□ -1.64
ATPAF1-211ENST00000534216 REPS1Q96D71 796 aa4.82□□□□□ -1.64
ATPAF1-211ENST00000534216 RSPRY1Q96DX4 576 aa4.82□□□□□ -1.64
ATPAF1-211ENST00000534216 STRBPQ96SI9 672 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-211ENST00000534216 APOL5Q9BWW9 433 aa4.82□□□□□ -1.64
ATPAF1-211ENST00000534216 DHX36Q9H2U1 1008 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-211ENST00000534216 CCNL1Q9UK58 526 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-211ENST00000534216 HDAC9Q9UKV0 1011 aa4.82□□□□□ -1.64
ATPAF1-211ENST00000534216 FER1L4A9Z1Z3 1794 aa4.82□□□□□ -1.64
ATPAF1-211ENST00000534216 PCSK5Q92824 1860 aa4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 WIPF3A6NGB9 483 aa4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 MANSC4A6NHS7 340 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 F8W8V4 182 aa4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 CD3EAPO15446 510 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 RGS10O43665 173 aa4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 PRKCBP05771 671 aa4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 DLDP09622 509 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 NPSP0C0P6 89 aa4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 ACVR2AP27037 513 aa4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 PRKAR1BP31321 381 aa4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 CYP4F2P78329 520 aa4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 SLC29A2Q14542 456 aa4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 SUMO4Q6EEV6 95 aa4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 MTHFD1LQ6UB35 978 aa4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 UNC13DQ70J99 1090 aa4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 PTF1AQ7RTS3 328 aa4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 YAF2Q8IY57 180 aa4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 PHKBQ93100 1093 aa4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 THAP7Q9BT49 309 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 DPCDQ9BVM2 203 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 ADARB2Q9NS39 739 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 SH3BP4Q9P0V3 963 aa4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 MID2Q9UJV3 735 aa4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 ITGB1BP2Q9UKP3 347 aa4.81□□□□□ -1.64
ATPAF1-211ENST00000534216 RAB27BO00194 218 aa4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 KIF3BO15066 747 aa4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 PQBP1O60828 265 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 MT-ND5P03915 603 aa4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 BTF3P20290 206 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 EPHA3P29320 983 aa4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 UQCRC1P31930 480 aa4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 CARSP49589 748 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 CPT1AP50416 773 aa4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 ITGA8P53708 1063 aa4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 E2F1Q01094 437 aa4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 TFF2Q03403 129 aa4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 ZNF750Q32MQ0 723 aa4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 TBC1D25Q3MII6 688 aa4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 NAPRTQ6XQN6 538 aa4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 DPY19L3Q6ZPD9 716 aa4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 ABHD11Q8NFV4 315 aa4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 IPCEF1Q8WWN9 437 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 VOPP1Q96AW1 172 aa4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 LENG8Q96PV6 779 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 MACROD1Q9BQ69 325 aa4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 UNKQ9C0B0 810 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 DKK4Q9UBT3 224 aa4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 DRG1Q9Y295 367 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 FRMD4BQ9Y2L6 1034 aa4.8□□□□□ -1.64
ATPAF1-211ENST00000534216 FNDC1Q4ZHG4 1894 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 RHPN2P1A8MT19 583 aa4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 FOXN3O00409 490 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 PIAS2O75928 621 aa4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 PDE8BO95263 885 aa4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 PRKCGP05129 697 aa4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 IL1R2P27930 398 aa4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 HTRA4P83105 476 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 HOXA4Q00056 320 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 TIAL1Q01085 375 aaKnown RBP eCLIP4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 SDR16C5Q8N3Y7 309 aa4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 SEMA6DQ8NFY4 1073 aa4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 SMCR8Q8TEV9 937 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 DPF1Q92782 380 aa4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 ZBTB45Q96K62 511 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 SNX22Q96L94 193 aa4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 PRR25Q96S07 402 aa4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 SARGQ9BW04 601 aa4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 BRIP1Q9BX63 1249 aa4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 VN1R3Q9BXE9 311 aa4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 FAM83DQ9H4H8 585 aa4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 USP22Q9UPT9 525 aa4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 CORO2BQ9UQ03 480 aa4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 SNX13Q9Y5W8 968 aa4.79□□□□□ -1.64
ATPAF1-211ENST00000534216 AQP7P3A6NL99 342 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 LINC01548A6NM66 108 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 AP4M1O00189 453 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 PSMD9O00233 223 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 EIF5BO60841 1220 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 INMTO95050 263 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 IL18RAPO95256 599 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 ANXA2P07355 339 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 NHLRC4P0CG21 123 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms