RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 DDHD2O94830 711 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 CYP1A1P04798 512 aaPredicted RBP10.06□□□□□ -0.8
RTL1-201ENST00000534062 MYBL1P10243 752 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 RPL9P32969 192 aaKnown RBP10.06□□□□□ -0.8
RTL1-201ENST00000534062 RPL7AP62424 266 aaKnown RBP10.06□□□□□ -0.8
RTL1-201ENST00000534062 CNGA2Q16280 664 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 WHAMMP3Q1A5X7 153 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 THEM5Q8N1Q8 247 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.06□□□□□ -0.8
RTL1-201ENST00000534062 B3GALT6Q96L58 329 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 ZBED2Q9BTP6 218 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 SEZ6LQ9BYH1 1024 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 WNT8AQ9H1J5 351 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 STXBP5LQ9Y2K9 1186 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 A0A0A6YYK5 440 aaPredicted RBP10.06□□□□□ -0.8
RTL1-201ENST00000534062 LSM8O95777 96 aaKnown RBP10.06□□□□□ -0.8
RTL1-201ENST00000534062 EN2P19622 333 aaPredicted RBP10.06□□□□□ -0.8
RTL1-201ENST00000534062 PSMA2P25787 234 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 PLEKHG4Q58EX7 1191 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 KIAA1841Q6NSI8 718 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.06□□□□□ -0.8
RTL1-201ENST00000534062 CCDC25Q86WR0 208 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 SCN4BQ8IWT1 228 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 SCUBE3Q8IX30 993 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 RNF34Q969K3 372 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 LMCD1Q9NZU5 365 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 KANSL3Q9P2N6 904 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 STRIP2Q9ULQ0 834 aa10.06□□□□□ -0.8
RTL1-201ENST00000534062 ALDH2P05091 517 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 PTPN1P18031 435 aaKnown RBP10.05□□□□□ -0.8
RTL1-201ENST00000534062 LRPAP1P30533 357 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 MAP3K7CLP57077 242 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 MCCD1P59942 119 aaPredicted RBP10.05□□□□□ -0.8
RTL1-201ENST00000534062 ATP11AP98196 1134 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 TSPY1Q01534 308 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 UPP1Q16831 310 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 FAM171A1Q5VUB5 890 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 TRAF7Q6Q0C0 670 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 MON1BQ7L1V2 547 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 FUKQ8N0W3 1084 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 UBR7Q8N806 425 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 AP1M1Q9BXS5 423 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 KRT82Q9NSB4 513 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 G3BP2Q9UN86 482 aaKnown RBP10.05□□□□□ -0.8
RTL1-201ENST00000534062 CNTN6Q9UQ52 1028 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 MYO9BQ13459 2157 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 HSF2BPO75031 334 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 OR4Q2P0C623 313 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 MMP8P22894 467 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 PCSK1P29120 753 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 YWHAHQ04917 246 aaPredicted RBP10.05□□□□□ -0.8
RTL1-201ENST00000534062 C1QBPQ07021 282 aaKnown RBP10.05□□□□□ -0.8
RTL1-201ENST00000534062 INCA1Q0VD86 236 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 CALCOCO2Q13137 446 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 YTHDF3Q7Z739 585 aaKnown RBP10.05□□□□□ -0.8
RTL1-201ENST00000534062 UNC93AQ86WB7 457 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 TOP6BLQ8N6T0 577 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 FEZF2Q8TBJ5 459 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 KBTBD7Q8WVZ9 684 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 ACSF2Q96CM8 615 aaPredicted RBP10.05□□□□□ -0.8
RTL1-201ENST00000534062 PGLYRP2Q96PD5 576 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 NGRNQ9NPE2 291 aaKnown RBP10.05□□□□□ -0.8
RTL1-201ENST00000534062 PCSK1NQ9UHG2 260 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 KIAA1257Q9ULG3 409 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 NCANO14594 1321 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 ANK1P16157 1881 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 TRAPPC3O43617 180 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 TUBBP07437 444 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 LHX1P48742 406 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 ALDH7A1P49419 539 aaKnown RBP10.05□□□□□ -0.8
RTL1-201ENST00000534062 STILQ15468 1287 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 KCTD19Q17RG1 926 aaPredicted RBP10.05□□□□□ -0.8
RTL1-201ENST00000534062 XKR4Q5GH76 650 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 MEI1Q5TIA1 1274 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 SIX6OS1Q8N1H7 587 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 TSPAN18Q96SJ8 248 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 B3GNT5Q9BYG0 378 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 ZWILCHQ9H900 591 aa10.05□□□□□ -0.8
RTL1-201ENST00000534062 MYBPHLA2RUH7 354 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 CYP1A2P05177 515 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 SYN1P17600 705 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 MARCKSL1P49006 195 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 MAMLD1Q13495 774 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 PAPD7Q5XG87 772 aaKnown RBP10.04□□□□□ -0.8
RTL1-201ENST00000534062 PPP1R2P3Q6NXS1 205 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 DCLRE1AQ6PJP8 1040 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 OLIG1Q8TAK6 271 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 APBB2Q92870 758 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 PAIP2Q9BPZ3 127 aaKnown RBP10.04□□□□□ -0.8
RTL1-201ENST00000534062 ZNF518BQ9C0D4 1074 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 MCOLN1Q9GZU1 580 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 GDAP2Q9NXN4 497 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 ABI2Q9NYB9 513 aaPredicted RBP10.04□□□□□ -0.8
RTL1-201ENST00000534062 STAU1O95793 577 aaKnown RBP10.04□□□□□ -0.8
RTL1-201ENST00000534062 ERBB2P04626 1255 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 CPB1P15086 417 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 KAZNQ674X7 775 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 PMF1Q6P1K2 205 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 ANKRD33Q7Z3H0 272 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 ZNF598Q86UK7 904 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms