RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 LSM14AQ8ND56 463 aaKnown RBP4.87□□□□□ -1.63
ITGB1-219ENST00000534049 C1GALT1C1Q96EU7 318 aa4.87□□□□□ -1.63
ITGB1-219ENST00000534049 HAPLN3Q96S86 360 aa4.87□□□□□ -1.63
ITGB1-219ENST00000534049 C1orf43Q9BWL3 253 aa4.87□□□□□ -1.63
ITGB1-219ENST00000534049 ACTRT3Q9BYD9 372 aa4.87□□□□□ -1.63
ITGB1-219ENST00000534049 GRPEL1Q9HAV7 217 aa4.87□□□□□ -1.63
ITGB1-219ENST00000534049 ASB6Q9NWX5 421 aa4.87□□□□□ -1.63
ITGB1-219ENST00000534049 CWC15Q9P013 229 aaKnown RBP4.87□□□□□ -1.63
ITGB1-219ENST00000534049 PNMA8BQ9ULN7 279 aaPredicted RBP4.87□□□□□ -1.63
ITGB1-219ENST00000534049 SMC3Q9UQE7 1217 aa4.87□□□□□ -1.63
ITGB1-219ENST00000534049 ADGRA2Q96PE1 1338 aa4.87□□□□□ -1.63
ITGB1-219ENST00000534049 PCSK5Q92824 1860 aa4.87□□□□□ -1.63
ITGB1-219ENST00000534049 ARHGAP31Q2M1Z3 1444 aa4.87□□□□□ -1.63
ITGB1-219ENST00000534049 ADGRB3O60242 1522 aa4.87□□□□□ -1.63
ITGB1-219ENST00000534049 PRSS29PA6NIE9 313 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 LINC00473A8K010 186 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 H0YHG0 523 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 H3BUI4 141 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 M0QYG6 137 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 IPO8O15397 1037 aaKnown RBP4.86□□□□□ -1.63
ITGB1-219ENST00000534049 TLR5O60602 858 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 PIM1P11309 404 aaPredicted RBP4.86□□□□□ -1.63
ITGB1-219ENST00000534049 ZNF37AP17032 561 aaPredicted RBP4.86□□□□□ -1.63
ITGB1-219ENST00000534049 GSCP56915 257 aaPredicted RBP4.86□□□□□ -1.63
ITGB1-219ENST00000534049 LOXL3P58215 753 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 SYCP1Q15431 976 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 ATAT1Q5SQI0 421 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 GORABQ5T7V8 394 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 ZNF618Q5T7W0 954 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 TSTD2Q5T7W7 516 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 SUMO4Q6EEV6 95 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 GGT6Q6P531 493 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 LAYNQ6UX15 382 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 ZNF551Q7Z340 670 aaPredicted RBP4.86□□□□□ -1.63
ITGB1-219ENST00000534049 ZNF804AQ7Z570 1209 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 CATIPQ7Z7H3 387 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 FAM109AQ8N4B1 249 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 MYRIPQ8NFW9 859 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 HASPINQ8TF76 798 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 HPS3Q969F9 1004 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 SLC35A4Q96G79 324 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 CAMKK2Q96RR4 588 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 AMBRA1Q9C0C7 1298 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 TMX4Q9H1E5 349 aaPredicted RBP4.86□□□□□ -1.63
ITGB1-219ENST00000534049 NOL7Q9UMY1 257 aaKnown RBP4.86□□□□□ -1.63
ITGB1-219ENST00000534049 SH2B3Q9UQQ2 575 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 STXBP5LQ9Y2K9 1186 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 PLEKHM1Q9Y4G2 1056 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 NPHP4O75161 1426 aaPredicted RBP4.86□□□□□ -1.63
ITGB1-219ENST00000534049 SCAF11Q99590 1463 aaKnown RBP4.86□□□□□ -1.63
ITGB1-219ENST00000534049 UNC13BO14795 1591 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 NWD1Q149M9 1564 aa4.86□□□□□ -1.63
ITGB1-219ENST00000534049 ANKRD18BA2A2Z9 1011 aa4.85□□□□□ -1.63
ITGB1-219ENST00000534049 KIF3BO15066 747 aa4.85□□□□□ -1.63
ITGB1-219ENST00000534049 DHX16O60231 1041 aaKnown RBP4.85□□□□□ -1.63
ITGB1-219ENST00000534049 RBMXL2O75526 392 aaKnown RBP4.85□□□□□ -1.63
ITGB1-219ENST00000534049 ONECUT2O95948 504 aa4.85□□□□□ -1.63
ITGB1-219ENST00000534049 ZFXP17010 805 aaPredicted RBP4.85□□□□□ -1.63
ITGB1-219ENST00000534049 PPIFP30405 207 aaKnown RBP4.85□□□□□ -1.63
ITGB1-219ENST00000534049 IRX1P78414 480 aaPredicted RBP4.85□□□□□ -1.63
ITGB1-219ENST00000534049 NKX6-1P78426 367 aaPredicted RBP4.85□□□□□ -1.63
ITGB1-219ENST00000534049 CBX1P83916 185 aa4.85□□□□□ -1.63
ITGB1-219ENST00000534049 JAKMIP3Q5VZ66 844 aa4.85□□□□□ -1.63
ITGB1-219ENST00000534049 NOL8Q76FK4 1167 aaKnown RBP4.85□□□□□ -1.63
ITGB1-219ENST00000534049 HOOK2Q96ED9 719 aa4.85□□□□□ -1.63
ITGB1-219ENST00000534049 IL17RBQ9NRM6 502 aa4.85□□□□□ -1.63
ITGB1-219ENST00000534049 IP6K2Q9UHH9 426 aa4.85□□□□□ -1.63
ITGB1-219ENST00000534049 FRMD4BQ9Y2L6 1034 aa4.85□□□□□ -1.63
ITGB1-219ENST00000534049 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.85□□□□□ -1.63
ITGB1-219ENST00000534049 MED1Q15648 1581 aaPredicted RBP4.85□□□□□ -1.63
ITGB1-219ENST00000534049 PIK3C2BO00750 1634 aa4.85□□□□□ -1.63
ITGB1-219ENST00000534049 COL11A2P13942 1736 aaPredicted RBP4.85□□□□□ -1.63
ITGB1-219ENST00000534049 KDM5AP29375 1690 aaKnown RBP4.84□□□□□ -1.63
ITGB1-219ENST00000534049 LRRC7Q96NW7 1537 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 CCDC144AA2RUR9 1427 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 NOS1P29475 1434 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 SYNRGQ9UMZ2 1314 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 CCDC189A1A4V9 331 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 GOLGA6CA6NDK9 693 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 GOLGA6BA6NDN3 693 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 LRRC3CA6NJW4 275 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 VPS4BO75351 444 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 ALDH1L1O75891 902 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 ABLIM3O94929 683 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 THP07101 528 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 HSP90AB1P08238 724 aaKnown RBP4.84□□□□□ -1.63
ITGB1-219ENST00000534049 GOLGA6DP0CG33 693 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 U2AF1L5P0DN76 240 aaPredicted RBP4.84□□□□□ -1.63
ITGB1-219ENST00000534049 PF4V1P10720 104 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 CYP2C9P11712 490 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 HSPA6P17066 643 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 CAPN2P17655 700 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 SCP2P22307 547 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 VIPR2P41587 438 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 MAGEA8P43361 318 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 PHKA1P46020 1223 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 ALDH9A1P49189 494 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 CCT8P50990 548 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 IGBP1P78318 339 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 U2AF1Q01081 240 aaKnown RBP eCLIP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms