RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 HNRNPABQ99729 332 aaKnown RBP11.5□□□□□ -0.57
SDHD-208ENST00000534010 SMOQ99835 787 aa11.5□□□□□ -0.57
SDHD-208ENST00000534010 RNF38Q9H0F5 515 aa11.5□□□□□ -0.57
SDHD-208ENST00000534010 PNPLA8Q9NP80 782 aa11.5□□□□□ -0.57
SDHD-208ENST00000534010 GKN1Q9NS71 199 aa11.5□□□□□ -0.57
SDHD-208ENST00000534010 MAGED2Q9UNF1 606 aaPredicted RBP11.5□□□□□ -0.57
SDHD-208ENST00000534010 R3HCC1Q9Y3T6 440 aaKnown RBP11.5□□□□□ -0.57
SDHD-208ENST00000534010 MYO18AQ92614 2054 aaKnown RBP11.5□□□□□ -0.57
SDHD-208ENST00000534010 NCAM2O15394 837 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 GREM1O60565 184 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 GFRA3O60609 400 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 BEST1O76090 585 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 USP17L7P0C7H9 530 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 GRIK1P39086 918 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 TUBP50607 506 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 MARSP56192 900 aaKnown RBP11.49□□□□□ -0.57
SDHD-208ENST00000534010 FKBP3Q00688 224 aaKnown RBP11.49□□□□□ -0.57
SDHD-208ENST00000534010 CYP27A1Q02318 531 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 RUNX3Q13761 415 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 MTF1Q14872 753 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 ITPRIPL2Q3MIP1 535 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 CBWD6Q4V339 395 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 CBWD3Q5JTY5 395 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 CBWD5Q5RIA9 395 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 TTI2Q6NXR4 508 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 CLEC17AQ6ZS10 378 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 NUP93Q8N1F7 819 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 SYNPOQ8N3V7 929 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 ZNF276Q8N554 614 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 ARL14EPQ8N8R7 260 aaPredicted RBP11.49□□□□□ -0.57
SDHD-208ENST00000534010 OSCP1Q8WVF1 389 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 EZH1Q92800 747 aaPredicted RBP11.49□□□□□ -0.57
SDHD-208ENST00000534010 CCDC34Q96HJ3 373 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 FAM126AQ9BYI3 521 aaPredicted RBP11.49□□□□□ -0.57
SDHD-208ENST00000534010 NIF3L1Q9GZT8 377 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 EHD2Q9NZN4 543 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 MAN1B1Q9UKM7 699 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 PCDHGA2Q9Y5H1 932 aa11.49□□□□□ -0.57
SDHD-208ENST00000534010 TRAV19A0A0A6YYK7 116 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 TRIM49BA6NDI0 452 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 K7ESF4 209 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 STK25O00506 426 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 DPYSL4O14531 572 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 CETN3O15182 167 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 PHACTR2O75167 634 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 RTN3O95197 1032 aaPredicted RBP11.48□□□□□ -0.57
SDHD-208ENST00000534010 P4HA1P13674 534 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 PGFP49763 221 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 SLC5A3P53794 718 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 TAF10Q12962 218 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 PDGFRLQ15198 375 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 TAF12Q16514 161 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 DGKKQ5KSL6 1271 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 TRIM68Q6AZZ1 485 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 SCARA5Q6ZMJ2 495 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 CLEC20AQ6ZU45 233 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 ACOT1Q86TX2 421 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 YAF2Q8IY57 180 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 SPEM1Q8N4L4 309 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 C12orf29Q8N999 325 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 FBXL13Q8NEE6 735 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 SCAMP5Q8TAC9 235 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 LMO3Q8TAP4 145 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 CSGALNACT1Q8TDX6 532 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 SMARCE1Q969G3 411 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 SMARCD1Q96GM5 515 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 DHTKD1Q96HY7 919 aaPredicted RBP11.48□□□□□ -0.57
SDHD-208ENST00000534010 MED15Q96RN5 788 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 LMAN1LQ9HAT1 526 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 DMAP1Q9NPF5 467 aaPredicted RBP11.48□□□□□ -0.57
SDHD-208ENST00000534010 C2orf42Q9NWW7 574 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 RAB20Q9NX57 234 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 USP3Q9Y6I4 520 aa11.48□□□□□ -0.57
SDHD-208ENST00000534010 CHURC1-FNTBB4DL54 471 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 SMC2O95347 1197 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 KRT13P13646 458 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 CCDC130P13994 396 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 ARSAP15289 507 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 HDCP19113 662 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 GJA4P35212 333 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 PIK3CAP42336 1068 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 MXI1P50539 228 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 PDE6CP51160 858 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 FSTL4Q6MZW2 842 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 GPRIN1Q7Z2K8 1008 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 FILIP1Q7Z7B0 1213 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 SLC4A11Q8NBS3 891 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 PDZD8Q8NEN9 1154 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 SLC2A14Q8TDB8 520 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 SH3RF2Q8TEC5 729 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 NKD2Q969F2 451 aaPredicted RBP11.47□□□□□ -0.57
SDHD-208ENST00000534010 EEF2KMTQ96G04 330 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 CEP63Q96MT8 703 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 EPC1Q9H2F5 836 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 EBF3Q9H4W6 596 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 ECT2Q9H8V3 914 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 FBRSL1Q9HCM7 1045 aaKnown RBP11.47□□□□□ -0.57
SDHD-208ENST00000534010 THG1LQ9NWX6 298 aaKnown RBP11.47□□□□□ -0.57
SDHD-208ENST00000534010 ZSCAN32Q9NX65 697 aa11.47□□□□□ -0.57
SDHD-208ENST00000534010 TRPM5Q9NZQ8 1165 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms