RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 DMAP1Q9NPF5 467 aaPredicted RBP11.09□□□□□ -0.63
CAPN1-225ENST00000533704 PRMT8Q9NR22 394 aaPredicted RBP11.09□□□□□ -0.63
CAPN1-225ENST00000533704 ZSCAN32Q9NX65 697 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 SMPD4Q9NXE4 827 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 HOOK1Q9UJC3 728 aaKnown RBP11.09□□□□□ -0.63
CAPN1-225ENST00000533704 KIAA1549LQ6ZVL6 1849 aa11.09□□□□□ -0.63
CAPN1-225ENST00000533704 ZNF840PA6NDX5 716 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 OTOL1A6NHN0 477 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-225ENST00000533704 RTN3O95197 1032 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-225ENST00000533704 MBL2P11226 248 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-225ENST00000533704 TRIM21P19474 475 aaKnown RBP11.08□□□□□ -0.64
CAPN1-225ENST00000533704 ADORA2BP29275 332 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 ASPAP45381 313 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 GAS6Q14393 721 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 ZCWPW2Q504Y3 356 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 WDR44Q5JSH3 913 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 ZNF658Q5TYW1 1059 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-225ENST00000533704 TCERG1LQ5VWI1 586 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 HEATR6Q6AI08 1181 aaKnown RBP11.08□□□□□ -0.64
CAPN1-225ENST00000533704 PAQR9Q6ZVX9 377 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 FUKQ8N0W3 1084 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 SPEM1Q8N4L4 309 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 C12orf29Q8N999 325 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 SCAMP5Q8TAC9 235 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 SLC2A14Q8TDB8 520 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 OSCP1Q8WVF1 389 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 IER2Q9BTL4 223 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 APOBEC3GQ9HC16 384 aaKnown RBP11.08□□□□□ -0.64
CAPN1-225ENST00000533704 ARHGAP26Q9UNA1 814 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 PCDHGA2Q9Y5H1 932 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 PCDHA5Q9Y5H7 936 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 CPQQ9Y646 472 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 VPS13AQ96RL7 3174 aa11.08□□□□□ -0.64
CAPN1-225ENST00000533704 WDR87Q6ZQQ6 2873 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 MYO18AQ92614 2054 aaKnown RBP11.07□□□□□ -0.64
CAPN1-225ENST00000533704 LEFTY2O00292 366 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 GJA4P35212 333 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 PPP3CCP48454 512 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 MXI1P50539 228 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 SLC5A3P53794 718 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 MAP3K7CLP57077 242 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 AMPD2Q01433 879 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 GRSF1Q12849 480 aaKnown RBP eCLIP11.07□□□□□ -0.64
CAPN1-225ENST00000533704 EDRF1Q3B7T1 1238 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 DCAF17Q5H9S7 520 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-225ENST00000533704 NAIF1Q69YI7 327 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-225ENST00000533704 KRT39Q6A163 491 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 FSTL4Q6MZW2 842 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 ENGASEQ8NFI3 743 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 ATP2A3Q93084 1043 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 CHFRQ96EP1 664 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 GSDMAQ96QA5 445 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 TWNKQ96RR1 684 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 NIF3L1Q9GZT8 377 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 RNF38Q9H0F5 515 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 LINC00597Q9H2U6 94 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 ECT2Q9H8V3 914 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 TMEM8AQ9HCN3 771 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 NCDNQ9UBB6 729 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 CHORDC1Q9UHD1 332 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-225ENST00000533704 USP34Q70CQ2 3546 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 ZNF292O60281 2723 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 EML5Q05BV3 1969 aa11.07□□□□□ -0.64
CAPN1-225ENST00000533704 TRIM49BA6NDI0 452 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 CHURC1-FNTBB4DL54 471 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 STX10O60499 249 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 BEST1O76090 585 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 EGFP01133 1207 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 FAM200BP0CF97 657 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 FNTBP49356 437 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 GALK1P51570 392 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 NRLP54845 237 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 NR1H3Q13133 447 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 STIM1Q13586 685 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 CCINQ13939 588 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 LPAL2Q16609 132 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 EML3Q32P44 896 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 ZNF394Q53GI3 561 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 ANKRD40Q6AI12 368 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 KLHL10Q6JEL2 608 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 PRR23BQ6ZRT6 265 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 UNC93AQ86WB7 457 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 KIAA2013Q8IYS2 634 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 DCLK2Q8N568 766 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 ZBTB44Q8NCP5 570 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 PDZD8Q8NEN9 1154 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 SEMA4DQ92854 862 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 CYFIP2Q96F07 1278 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 SMOQ99835 787 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 P2RY13Q9BPV8 354 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 NT5C1AQ9BXI3 368 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 DNAI2Q9GZS0 605 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 NACA2Q9H009 215 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 CYP3A43Q9HB55 503 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 C2orf42Q9NWW7 574 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 GMIPQ9P107 970 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 CFAP97Q9P2B7 532 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 SMG5Q9UPR3 1016 aaKnown RBP11.06□□□□□ -0.64
CAPN1-225ENST00000533704 MYO15AQ9UKN7 3530 aa11.06□□□□□ -0.64
CAPN1-225ENST00000533704 BIN1O00499 593 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms