RNA–Protein interactions for RNA: ENST00000533666.5

CMTM1-217, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-217ENST00000533666 ACP6Q9NPH0 428 aa14.86□□□□□ -0.03
CMTM1-217ENST00000533666 AVENQ9NQS1 362 aaPredicted RBP14.86□□□□□ -0.03
CMTM1-217ENST00000533666 ST7Q9NRC1 585 aa14.86□□□□□ -0.03
CMTM1-217ENST00000533666 SEPT11Q9NVA2 429 aaKnown RBP14.86□□□□□ -0.03
CMTM1-217ENST00000533666 THEGQ9P2T0 379 aa14.86□□□□□ -0.03
CMTM1-217ENST00000533666 NOCTQ9UK39 431 aaKnown RBP14.86□□□□□ -0.03
CMTM1-217ENST00000533666 SART1O43290 800 aaKnown RBP14.85□□□□□ -0.03
CMTM1-217ENST00000533666 MFAP3LO75121 409 aa14.85□□□□□ -0.03
CMTM1-217ENST00000533666 FBXO21O94952 628 aa14.85□□□□□ -0.03
CMTM1-217ENST00000533666 CALCAP01258 141 aa14.85□□□□□ -0.03
CMTM1-217ENST00000533666 RHOP08100 348 aa14.85□□□□□ -0.03
CMTM1-217ENST00000533666 MYL4P12829 197 aa14.85□□□□□ -0.03
CMTM1-217ENST00000533666 HNRNPH3P31942 346 aaKnown RBP14.85□□□□□ -0.03
CMTM1-217ENST00000533666 GPD2P43304 727 aa14.85□□□□□ -0.03
CMTM1-217ENST00000533666 CACNA2D1P54289 1103 aa14.85□□□□□ -0.03
CMTM1-217ENST00000533666 TBX2Q13207 712 aaPredicted RBP14.85□□□□□ -0.03
CMTM1-217ENST00000533666 CBX2Q14781 532 aaPredicted RBP14.85□□□□□ -0.03
CMTM1-217ENST00000533666 ARHGAP15Q53QZ3 475 aa14.85□□□□□ -0.03
CMTM1-217ENST00000533666 DENND1BQ6P3S1 775 aa14.85□□□□□ -0.03
CMTM1-217ENST00000533666 ARHGAP18Q8N392 663 aa14.85□□□□□ -0.03
CMTM1-217ENST00000533666 ZMIZ2Q8NF64 920 aa14.85□□□□□ -0.03
CMTM1-217ENST00000533666 SLC35F5Q8WV83 523 aa14.85□□□□□ -0.03
CMTM1-217ENST00000533666 DDX1Q92499 740 aaKnown RBP14.85□□□□□ -0.03
CMTM1-217ENST00000533666 GOLGA1Q92805 767 aa14.85□□□□□ -0.03
CMTM1-217ENST00000533666 DNAJC7Q99615 494 aa14.85□□□□□ -0.03
CMTM1-217ENST00000533666 ZSWIM1Q9BR11 485 aa14.85□□□□□ -0.03
CMTM1-217ENST00000533666 TTLL2Q9BWV7 592 aa14.85□□□□□ -0.03
CMTM1-217ENST00000533666 WDR6Q9NNW5 1121 aaKnown RBP14.85□□□□□ -0.03
CMTM1-217ENST00000533666 TRPM5Q9NZQ8 1165 aa14.85□□□□□ -0.03
CMTM1-217ENST00000533666 MRPS23Q9Y3D9 190 aaKnown RBP14.85□□□□□ -0.03
CMTM1-217ENST00000533666 USP15Q9Y4E8 981 aaPredicted RBP14.85□□□□□ -0.03
CMTM1-217ENST00000533666 TNFRSF10BO14763 440 aa14.84□□□□□ -0.03
CMTM1-217ENST00000533666 BEST1O76090 585 aa14.84□□□□□ -0.03
CMTM1-217ENST00000533666 MMEP08473 750 aa14.84□□□□□ -0.03
CMTM1-217ENST00000533666 FSHRP23945 695 aa14.84□□□□□ -0.03
CMTM1-217ENST00000533666 NSFP46459 744 aaKnown RBP14.84□□□□□ -0.03
CMTM1-217ENST00000533666 PSEN1P49768 467 aa14.84□□□□□ -0.03
CMTM1-217ENST00000533666 KIF11P52732 1056 aa14.84□□□□□ -0.03
CMTM1-217ENST00000533666 EPHA5P54756 1037 aa14.84□□□□□ -0.03
CMTM1-217ENST00000533666 IFRD2Q12894 506 aaPredicted RBP14.84□□□□□ -0.03
CMTM1-217ENST00000533666 PASD1Q8IV76 773 aa14.84□□□□□ -0.03
CMTM1-217ENST00000533666 STKLD1Q8NE28 680 aa14.84□□□□□ -0.03
CMTM1-217ENST00000533666 MRPS31Q92665 395 aaKnown RBP14.84□□□□□ -0.03
CMTM1-217ENST00000533666 FBXO32Q969P5 355 aa14.84□□□□□ -0.03
CMTM1-217ENST00000533666 PPP1R13BQ96KQ4 1090 aa14.84□□□□□ -0.03
CMTM1-217ENST00000533666 TRIM62Q9BVG3 475 aa14.84□□□□□ -0.03
CMTM1-217ENST00000533666 DEF6Q9H4E7 631 aa14.84□□□□□ -0.03
CMTM1-217ENST00000533666 HAUS4Q9H6D7 363 aa14.84□□□□□ -0.03
CMTM1-217ENST00000533666 CNGB3Q9NQW8 809 aa14.84□□□□□ -0.03
CMTM1-217ENST00000533666 ABHD10Q9NUJ1 306 aa14.84□□□□□ -0.03
CMTM1-217ENST00000533666 TMEM30AQ9NV96 361 aa14.84□□□□□ -0.03
CMTM1-217ENST00000533666 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.84□□□□□ -0.03
CMTM1-217ENST00000533666 DNMT3BQ9UBC3 853 aaKnown RBP14.84□□□□□ -0.03
CMTM1-217ENST00000533666 SCML2Q9UQR0 700 aa14.84□□□□□ -0.03
CMTM1-217ENST00000533666 CLUHO75153 1309 aa14.84□□□□□ -0.03
CMTM1-217ENST00000533666 SOBPA7XYQ1 873 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 HHLA1C9JL84 531 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 MBTPS2O43462 519 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 ZBED1O96006 694 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 HMGA1P17096 107 aaKnown RBP14.83□□□□□ -0.04
CMTM1-217ENST00000533666 DDX6P26196 483 aaKnown RBP eCLIP14.83□□□□□ -0.04
CMTM1-217ENST00000533666 GABRR2P28476 465 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 SSTR3P32745 418 aaPredicted RBP14.83□□□□□ -0.04
CMTM1-217ENST00000533666 CDH5P33151 784 aaPredicted RBP14.83□□□□□ -0.04
CMTM1-217ENST00000533666 TKTL1P51854 596 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 ADKP55263 362 aaKnown RBP14.83□□□□□ -0.04
CMTM1-217ENST00000533666 GSDMDP57764 484 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 FMO1Q01740 532 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 PDCLQ13371 301 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 ARID5BQ14865 1188 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 RAB41Q5JT25 222 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 PTCRAQ6ISU1 281 aaPredicted RBP14.83□□□□□ -0.04
CMTM1-217ENST00000533666 PMF1Q6P1K2 205 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 OTOP3Q7RTS5 596 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 TADA2BQ86TJ2 420 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 MON1AQ86VX9 555 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 ERICH1Q86X53 443 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 ZDHHC17Q8IUH5 632 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 SLC20A1Q8WUM9 679 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 ATXN2LQ8WWM7 1075 aaKnown RBP14.83□□□□□ -0.04
CMTM1-217ENST00000533666 SUSD6Q92537 303 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 ACSF2Q96CM8 615 aaPredicted RBP14.83□□□□□ -0.04
CMTM1-217ENST00000533666 CDK5RAP1Q96SZ6 601 aaKnown RBP14.83□□□□□ -0.04
CMTM1-217ENST00000533666 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.83□□□□□ -0.04
CMTM1-217ENST00000533666 ATXN3LQ9H3M9 355 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 TLR8Q9NR97 1041 aaKnown RBP14.83□□□□□ -0.04
CMTM1-217ENST00000533666 IL37Q9NZH6 218 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 ZFP37Q9Y6Q3 630 aaPredicted RBP14.83□□□□□ -0.04
CMTM1-217ENST00000533666 GREB1Q4ZG55 1949 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 ZNF638Q14966 1978 aaKnown RBP14.83□□□□□ -0.04
CMTM1-217ENST00000533666 NCANO14594 1321 aa14.83□□□□□ -0.04
CMTM1-217ENST00000533666 PATJQ8NI35 1801 aa14.82□□□□□ -0.04
CMTM1-217ENST00000533666 PRUNE2Q8WUY3 3088 aa14.82□□□□□ -0.04
CMTM1-217ENST00000533666 C2orf16Q68DN1 1984 aa14.82□□□□□ -0.04
CMTM1-217ENST00000533666 DOCK6Q96HP0 2047 aa14.82□□□□□ -0.04
CMTM1-217ENST00000533666 FAM92AA1XBS5 289 aa14.82□□□□□ -0.04
CMTM1-217ENST00000533666 LCP1P13796 627 aa14.82□□□□□ -0.04
CMTM1-217ENST00000533666 PFKLP17858 780 aa14.82□□□□□ -0.04
CMTM1-217ENST00000533666 RGS7P49802 495 aa14.82□□□□□ -0.04
CMTM1-217ENST00000533666 MRPS5P82675 430 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms