RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 VPS36Q86VN1 386 aa18.41■□□□□ 0.54
NXF1-216ENST00000533499 DDX1Q92499 740 aaKnown RBP18.41■□□□□ 0.54
NXF1-216ENST00000533499 SYN2Q92777 582 aaPredicted RBP18.41■□□□□ 0.54
NXF1-216ENST00000533499 FBXO32Q969P5 355 aa18.41■□□□□ 0.54
NXF1-216ENST00000533499 MSLNLQ96KJ4 702 aa18.41■□□□□ 0.54
NXF1-216ENST00000533499 ZNF334Q9HCZ1 680 aaPredicted RBP18.41■□□□□ 0.54
NXF1-216ENST00000533499 ABHD10Q9NUJ1 306 aa18.41■□□□□ 0.54
NXF1-216ENST00000533499 EHD2Q9NZN4 543 aa18.41■□□□□ 0.54
NXF1-216ENST00000533499 MRPS23Q9Y3D9 190 aaKnown RBP18.41■□□□□ 0.54
NXF1-216ENST00000533499 USP15Q9Y4E8 981 aaPredicted RBP18.41■□□□□ 0.54
NXF1-216ENST00000533499 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.4■□□□□ 0.54
NXF1-216ENST00000533499 TMCO5BA8MYB1 307 aa18.4■□□□□ 0.54
NXF1-216ENST00000533499 RHOP08100 348 aa18.4■□□□□ 0.54
NXF1-216ENST00000533499 PLEKP08567 350 aaPredicted RBP18.4■□□□□ 0.54
NXF1-216ENST00000533499 GJA1P17302 382 aa18.4■□□□□ 0.54
NXF1-216ENST00000533499 GABRR2P28476 465 aa18.4■□□□□ 0.54
NXF1-216ENST00000533499 MTHFRP42898 656 aa18.4■□□□□ 0.54
NXF1-216ENST00000533499 GPD2P43304 727 aa18.4■□□□□ 0.54
NXF1-216ENST00000533499 PLA2G4AP47712 749 aa18.4■□□□□ 0.54
NXF1-216ENST00000533499 TFF2Q03403 129 aa18.4■□□□□ 0.54
NXF1-216ENST00000533499 PKDCCQ504Y2 493 aa18.4■□□□□ 0.54
NXF1-216ENST00000533499 ZNF571Q7Z3V5 609 aaPredicted RBP18.4■□□□□ 0.54
NXF1-216ENST00000533499 SLC35F5Q8WV83 523 aa18.4■□□□□ 0.54
NXF1-216ENST00000533499 CPA5Q8WXQ8 436 aa18.4■□□□□ 0.54
NXF1-216ENST00000533499 ING5Q8WYH8 240 aa18.4■□□□□ 0.54
NXF1-216ENST00000533499 DNAJC7Q99615 494 aa18.4■□□□□ 0.54
NXF1-216ENST00000533499 MIS12Q9H081 205 aa18.4■□□□□ 0.54
NXF1-216ENST00000533499 S1PR5Q9H228 398 aa18.4■□□□□ 0.54
NXF1-216ENST00000533499 ATXN3LQ9H3M9 355 aa18.4■□□□□ 0.54
NXF1-216ENST00000533499 DEF6Q9H4E7 631 aa18.4■□□□□ 0.54
NXF1-216ENST00000533499 BZW2Q9Y6E2 419 aaKnown RBP18.4■□□□□ 0.54
NXF1-216ENST00000533499 C2orf16Q68DN1 1984 aa18.4■□□□□ 0.54
NXF1-216ENST00000533499 HHLA1C9JL84 531 aa18.39■□□□□ 0.53
NXF1-216ENST00000533499 USP17L7P0C7H9 530 aa18.39■□□□□ 0.53
NXF1-216ENST00000533499 HMGA1P17096 107 aaKnown RBP18.39■□□□□ 0.53
NXF1-216ENST00000533499 SP100P23497 879 aaPredicted RBP18.39■□□□□ 0.53
NXF1-216ENST00000533499 FSHRP23945 695 aa18.39■□□□□ 0.53
NXF1-216ENST00000533499 PRKCIP41743 596 aa18.39■□□□□ 0.53
NXF1-216ENST00000533499 TAF10Q12962 218 aa18.39■□□□□ 0.53
NXF1-216ENST00000533499 PDCLQ13371 301 aa18.39■□□□□ 0.53
NXF1-216ENST00000533499 TRIM72Q6ZMU5 477 aa18.39■□□□□ 0.53
NXF1-216ENST00000533499 GET4Q7L5D6 327 aaPredicted RBP18.39■□□□□ 0.53
NXF1-216ENST00000533499 SLC30A5Q8TAD4 765 aa18.39■□□□□ 0.53
NXF1-216ENST00000533499 IPO4Q8TEX9 1081 aaKnown RBP18.39■□□□□ 0.53
NXF1-216ENST00000533499 NDRG1Q92597 394 aaKnown RBP18.39■□□□□ 0.53
NXF1-216ENST00000533499 PPP1R13BQ96KQ4 1090 aa18.39■□□□□ 0.53
NXF1-216ENST00000533499 SLITRK1Q96PX8 696 aa18.39■□□□□ 0.53
NXF1-216ENST00000533499 PCDHB18PQ96TA0 734 aa18.39■□□□□ 0.53
NXF1-216ENST00000533499 ULBP1Q9BZM6 244 aa18.39■□□□□ 0.53
NXF1-216ENST00000533499 LHX5Q9H2C1 402 aa18.39■□□□□ 0.53
NXF1-216ENST00000533499 FBXO44Q9H4M3 255 aa18.39■□□□□ 0.53
NXF1-216ENST00000533499 SLITRK6Q9H5Y7 841 aa18.39■□□□□ 0.53
NXF1-216ENST00000533499 UXTQ9UBK9 157 aaPredicted RBP18.39■□□□□ 0.53
NXF1-216ENST00000533499 CHORDC1Q9UHD1 332 aaPredicted RBP18.39■□□□□ 0.53
NXF1-216ENST00000533499 CYTH4Q9UIA0 394 aa18.39■□□□□ 0.53
NXF1-216ENST00000533499 MYO16Q9Y6X6 1858 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 A0A1W2PRU2 124 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 GRXCR2A6NFK2 248 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 TNFRSF10BO14763 440 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 LSM8O95777 96 aaKnown RBP18.38■□□□□ 0.53
NXF1-216ENST00000533499 EIF4A3P38919 411 aaKnown RBP18.38■□□□□ 0.53
NXF1-216ENST00000533499 NSFP46459 744 aaKnown RBP18.38■□□□□ 0.53
NXF1-216ENST00000533499 KIF11P52732 1056 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 CYP4F8P98187 520 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 SMAD4Q13485 552 aaKnown RBP18.38■□□□□ 0.53
NXF1-216ENST00000533499 MEA1Q16626 185 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 CYP26C1Q6V0L0 522 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 ERICH1Q86X53 443 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 WDTC1Q8N5D0 677 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 TC2NQ8N9U0 490 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 SMRP1Q8NCR6 262 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 MSANTD4Q8NCY6 345 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 TCEAL4Q96EI5 215 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 HSFY1Q96LI6 401 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 CEP295NLQ96MC4 621 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 UBXN6Q9BZV1 441 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 TRPC7Q9HCX4 862 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 PNPLA8Q9NP80 782 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 TRPM5Q9NZQ8 1165 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 GMIPQ9P107 970 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 THEGQ9P2T0 379 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 IMPACTQ9P2X3 320 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 CLUHO75153 1309 aa18.38■□□□□ 0.53
NXF1-216ENST00000533499 PATJQ8NI35 1801 aa18.37■□□□□ 0.53
NXF1-216ENST00000533499 GREB1Q4ZG55 1949 aa18.37■□□□□ 0.53
NXF1-216ENST00000533499 ZNF638Q14966 1978 aaKnown RBP18.37■□□□□ 0.53
NXF1-216ENST00000533499 E5RJQ4 531 aa18.37■□□□□ 0.53
NXF1-216ENST00000533499 ZNF197O14709 1029 aa18.37■□□□□ 0.53
NXF1-216ENST00000533499 MBTPS2O43462 519 aa18.37■□□□□ 0.53
NXF1-216ENST00000533499 POU2F2P09086 479 aa18.37■□□□□ 0.53
NXF1-216ENST00000533499 CDC25CP30307 473 aa18.37■□□□□ 0.53
NXF1-216ENST00000533499 GBP2P32456 591 aaPredicted RBP18.37■□□□□ 0.53
NXF1-216ENST00000533499 ACADSBP45954 432 aa18.37■□□□□ 0.53
NXF1-216ENST00000533499 SNX16P57768 344 aa18.37■□□□□ 0.53
NXF1-216ENST00000533499 NOMO3P69849 1222 aa18.37■□□□□ 0.53
NXF1-216ENST00000533499 CBX2Q14781 532 aaPredicted RBP18.37■□□□□ 0.53
NXF1-216ENST00000533499 CLEC16AQ2KHT3 1053 aa18.37■□□□□ 0.53
NXF1-216ENST00000533499 SLC5A9Q2M3M2 681 aa18.37■□□□□ 0.53
NXF1-216ENST00000533499 C2CD6Q53TS8 623 aa18.37■□□□□ 0.53
NXF1-216ENST00000533499 HGSNATQ68CP4 663 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms