RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 EHD3Q9NZN3 535 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 SRP68Q9UHB9 627 aaKnown RBP8.12□□□□□ -1.11
CSRP1-218ENST00000533402 PLCL2Q9UPR0 1127 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 HNRNPDLO14979 420 aaKnown RBP8.12□□□□□ -1.11
CSRP1-218ENST00000533402 AKAP5P24588 427 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 GTF2H1P32780 548 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 BCAP31P51572 246 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 ALCAMQ13740 583 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 TFDP2Q14188 446 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 POLD3Q15054 466 aaPredicted RBP8.12□□□□□ -1.11
CSRP1-218ENST00000533402 ACAP2Q15057 778 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 ZC2HC1CQ53FD0 456 aaPredicted RBP8.12□□□□□ -1.11
CSRP1-218ENST00000533402 ZNF512BQ96KM6 892 aaPredicted RBP8.12□□□□□ -1.11
CSRP1-218ENST00000533402 GJD4Q96KN9 370 aaPredicted RBP8.12□□□□□ -1.11
CSRP1-218ENST00000533402 CBX6O95503 412 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 A1BGP04217 495 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 GYPCP04921 128 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 CCNA2P20248 432 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 SP100P23497 879 aaPredicted RBP8.12□□□□□ -1.11
CSRP1-218ENST00000533402 GSSP48637 474 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 TYSND1Q2T9J0 566 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 KCNT1Q5JUK3 1230 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 KRT74Q7RTS7 529 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 ZNF589Q86UQ0 364 aaPredicted RBP8.12□□□□□ -1.11
CSRP1-218ENST00000533402 UXS1Q8NBZ7 420 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 EAF2Q96CJ1 260 aaPredicted RBP8.12□□□□□ -1.11
CSRP1-218ENST00000533402 VTA1Q9NP79 307 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 HACL1Q9UJ83 578 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 COQ6Q9Y2Z9 468 aa8.12□□□□□ -1.11
CSRP1-218ENST00000533402 MTSS1O43312 755 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 MYL3P08590 195 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 USP17L8P0C7I0 530 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 GEMIN4P57678 1058 aaKnown RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 ROR1Q01973 937 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 MZT2BQ6NZ67 158 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 PI4K2BQ8TCG2 481 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 NAT14Q8WUY8 206 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 PYDC1Q8WXC3 89 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 ECSITQ9BQ95 431 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 MAD2L2Q9UI95 211 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 TNPO2O14787 897 aaKnown RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 CDC40O60508 579 aaKnown RBP eCLIP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 SNRPAP09012 282 aaKnown RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 TFE3P19532 575 aaPredicted RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 MMRN1Q13201 1228 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 CCDC157Q569K6 752 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 PRR23BQ6ZRT6 265 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 IFNL3Q8IZI9 196 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 FAM111AQ96PZ2 611 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 GRID1Q9ULK0 1009 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 CEMIPQ8WUJ3 1361 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 SERPINB9P50453 376 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 AQP5P55064 265 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 NAALADL2Q58DX5 795 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 MNTQ99583 582 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 C17orf80Q9BSJ5 609 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 DGCR6LQ9BY27 220 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 OXCT2Q9BYC2 517 aaPredicted RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 LRRC4Q9HBW1 653 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 ATF5Q9Y2D1 282 aaPredicted RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 SSU72P8A0A1W2PR75 194 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 ZNF12P17014 697 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 ST8SIA6P61647 398 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 USF2Q15853 346 aaPredicted RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 SLC9A4Q6AI14 798 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 TGFBRAP1Q8WUH2 860 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 HDAC2Q92769 488 aaKnown RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 ULK4Q96C45 1275 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 NUAK2Q9H093 628 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 KLHL8Q9P2G9 620 aaPredicted RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 TDRKHQ9Y2W6 561 aaKnown RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 MYH11P35749 1972 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 SLIT3O75094 1523 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 KRT87PA6NCN2 255 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 GAS2O43903 313 aaKnown RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 ENTPD5O75356 428 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 TRMUO75648 421 aaKnown RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 UNC5CO95185 931 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 ITGA8P53708 1063 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 ATP12AP54707 1039 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 FAPQ12884 760 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 TTLL4Q14679 1199 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 PHKG1Q16816 387 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 AARS2Q5JTZ9 985 aaKnown RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 CCSAPQ6IQ19 270 aaPredicted RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 SRBD1Q8N5C6 995 aaKnown RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 MARCH10Q8NA82 808 aaPredicted RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 TRPC4APQ8TEL6 797 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 PCIF1Q9H4Z3 704 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 PIH1D3Q9NQM4 214 aaKnown RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 INTS13Q9NVM9 706 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 NMRK1Q9NWW6 199 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 EIF2AK2P19525 551 aaKnown RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 SMAD1Q15797 465 aaKnown RBP8.11□□□□□ -1.11
CSRP1-218ENST00000533402 RBBP7Q16576 425 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 BTBD8Q5XKL5 378 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 TNS2Q63HR2 1409 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 FAM9CQ8IZT9 166 aa8.11□□□□□ -1.11
CSRP1-218ENST00000533402 ACAT2Q9BWD1 397 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms