RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 NIPA2Q8N8Q9 360 aa12.9□□□□□ -0.34
TGFBR3-211ENST00000533370 TMEM169Q96HH4 297 aa12.9□□□□□ -0.34
TGFBR3-211ENST00000533370 ABHD8Q96I13 439 aa12.9□□□□□ -0.34
TGFBR3-211ENST00000533370 FUBP3Q96I24 572 aaKnown RBP eCLIP12.9□□□□□ -0.34
TGFBR3-211ENST00000533370 MCEEQ96PE7 176 aa12.9□□□□□ -0.34
TGFBR3-211ENST00000533370 TRIM7Q9C029 511 aa12.9□□□□□ -0.34
TGFBR3-211ENST00000533370 GOLPH3Q9H4A6 298 aa12.9□□□□□ -0.34
TGFBR3-211ENST00000533370 LRRC4Q9HBW1 653 aa12.9□□□□□ -0.34
TGFBR3-211ENST00000533370 PNPLA8Q9NP80 782 aa12.9□□□□□ -0.34
TGFBR3-211ENST00000533370 DMAP1Q9NPF5 467 aaPredicted RBP12.9□□□□□ -0.34
TGFBR3-211ENST00000533370 CXXC1Q9P0U4 656 aaPredicted RBP12.9□□□□□ -0.34
TGFBR3-211ENST00000533370 TMEM59LQ9UK28 342 aa12.9□□□□□ -0.34
TGFBR3-211ENST00000533370 PCDHB5Q9Y5E4 795 aa12.9□□□□□ -0.34
TGFBR3-211ENST00000533370 PCDHB12Q9Y5F1 795 aa12.9□□□□□ -0.34
TGFBR3-211ENST00000533370 PCDHA3Q9Y5H8 950 aa12.9□□□□□ -0.34
TGFBR3-211ENST00000533370 CCDC66A2RUB6 948 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 KCNK3O14649 394 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 DDX3YO15523 660 aaKnown RBP12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 SART1O43290 800 aaKnown RBP12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 SRGAP2O75044 1071 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 GJB6O95452 261 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 SOD2P04179 222 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 GLI1P08151 1106 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 ATP2A2P16615 1042 aaKnown RBP12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 MAGEA11P43364 429 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 PEX5P50542 639 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 TERF1P54274 439 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 TUBB4BP68371 445 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 KRT17Q04695 432 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 RAB41Q5JT25 222 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 RTP2Q5QGT7 225 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 OLFML1Q6UWY5 402 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 VSTM1Q6UX27 236 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 SLC26A9Q7LBE3 791 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 HERC6Q8IVU3 1022 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 GPR65Q8IYL9 337 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 SIX6OS1Q8N1H7 587 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 CEP112Q8N8E3 955 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 MNS1Q8NEH6 495 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 C2orf15Q8WU43 125 aaKnown RBP12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 PIK3R5Q8WYR1 880 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 KHSRPQ92945 711 aaKnown RBP eCLIP12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 CD101Q93033 1021 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 KCNK16Q96T55 309 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 NCAPGQ9BPX3 1015 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 CNPY3Q9BT09 278 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 METTL5Q9NRN9 209 aaKnown RBP12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 ASNSD1Q9NWL6 643 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 ZMYND8Q9ULU4 1186 aaPredicted RBP12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 PACSIN2Q9UNF0 486 aaPredicted RBP12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 NR2E3Q9Y5X4 410 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 LTBP2Q14767 1821 aa12.89□□□□□ -0.35
TGFBR3-211ENST00000533370 HHLA1C9JL84 531 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 PIK3R2O00459 728 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 SLU7O95391 586 aaKnown RBP12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 PDGFRAP16234 1089 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 PSMA2P25787 234 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 CXCR5P32302 372 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 CTNNA1P35221 906 aaKnown RBP12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 GRIK1P39086 918 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 TKTL1P51854 596 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 ZNF143P52747 638 aaPredicted RBP12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 RNASE9P60153 205 aaKnown RBP12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 MRPS5P82675 430 aaKnown RBP12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 CKAP4Q07065 602 aaKnown RBP12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 CLUL1Q15846 466 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 RASIP1Q5U651 963 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 LRRC38Q5VT99 294 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 SLC8B1Q6J4K2 584 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 CC2D1AQ6P1N0 951 aaPredicted RBP12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 CREG2Q8IUH2 290 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 SCML4Q8N228 414 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 ZMIZ2Q8NF64 920 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 JOSD2Q8TAC2 188 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 SP7Q8TDD2 431 aaPredicted RBP12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 COG1Q8WTW3 980 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 RIN2Q8WYP3 895 aaPredicted RBP12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 CLP1Q92989 425 aaKnown RBP12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 B3GALT6Q96L58 329 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 C8orf48Q96LL4 319 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 HERC2P3Q9BVR0 1158 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 VN1R3Q9BXE9 311 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 CNGB3Q9NQW8 809 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 MTRRQ9UBK8 725 aa12.88□□□□□ -0.35
TGFBR3-211ENST00000533370 FNDC1Q4ZHG4 1894 aaPredicted RBP12.87□□□□□ -0.35
TGFBR3-211ENST00000533370 C2CD4BA6NLJ0 364 aa12.87□□□□□ -0.35
TGFBR3-211ENST00000533370 TRIM66O15016 1216 aa12.87□□□□□ -0.35
TGFBR3-211ENST00000533370 ZNF185O15231 689 aa12.87□□□□□ -0.35
TGFBR3-211ENST00000533370 HSF2BPO75031 334 aa12.87□□□□□ -0.35
TGFBR3-211ENST00000533370 RNF8O76064 485 aa12.87□□□□□ -0.35
TGFBR3-211ENST00000533370 ZBED1O96006 694 aa12.87□□□□□ -0.35
TGFBR3-211ENST00000533370 OR4Q2P0C623 313 aa12.87□□□□□ -0.35
TGFBR3-211ENST00000533370 DESP17661 470 aa12.87□□□□□ -0.35
TGFBR3-211ENST00000533370 GPD1P21695 349 aa12.87□□□□□ -0.35
TGFBR3-211ENST00000533370 CYP2F1P24903 491 aa12.87□□□□□ -0.35
TGFBR3-211ENST00000533370 PAFAH1B1P43034 410 aa12.87□□□□□ -0.35
TGFBR3-211ENST00000533370 GLUD2P49448 558 aa12.87□□□□□ -0.35
TGFBR3-211ENST00000533370 NDUFV1P49821 464 aa12.87□□□□□ -0.35
TGFBR3-211ENST00000533370 CACNA2D1P54289 1103 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms