RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 TKTL1P51854 596 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 ACSF2Q96CM8 615 aaPredicted RBP11.12□□□□□ -0.63
COLCA1-203ENST00000532918 PDGFCQ9NRA1 345 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 GAKO14976 1311 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 hCG_2014768A0A024R1R8 64 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 FAM47E-STBD1D6RA91 191 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 ADH1AP07327 375 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 RBP3P10745 1247 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 NCKAP1LP55160 1127 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 BEX3Q00994 111 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 GIT2Q14161 759 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 SEZ6Q53EL9 994 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 ANKS6Q68DC2 871 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 CBWD2Q8IUF1 395 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 ATXN7L3BQ96GX2 97 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 SEZ6LQ9BYH1 1024 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.12□□□□□ -0.63
COLCA1-203ENST00000532918 BARX2Q9UMQ3 279 aaPredicted RBP11.12□□□□□ -0.63
COLCA1-203ENST00000532918 CCDC195A0A1B0GUA6 201 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 ARFIP2P53365 341 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 TBX4P57082 545 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 USP38Q8NB14 1042 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 SLC5A5Q92911 643 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 APOL5Q9BWW9 433 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 HPS5Q9UPZ3 1129 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 DRG1Q9Y295 367 aaKnown RBP11.12□□□□□ -0.63
COLCA1-203ENST00000532918 IFRD1O00458 451 aaPredicted RBP11.12□□□□□ -0.63
COLCA1-203ENST00000532918 ANGPT2O15123 496 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 VPS26AO75436 327 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 APOA1P02647 267 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 CYP2A6P11509 494 aaPredicted RBP11.12□□□□□ -0.63
COLCA1-203ENST00000532918 PTPN11Q06124 597 aaPredicted RBP11.12□□□□□ -0.63
COLCA1-203ENST00000532918 FOXD4Q12950 439 aaPredicted RBP11.12□□□□□ -0.63
COLCA1-203ENST00000532918 SEC23AQ15436 765 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 CAPRIN2Q6IMN6 1127 aaKnown RBP11.12□□□□□ -0.63
COLCA1-203ENST00000532918 ZNF720Q7Z2F6 126 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 TAGAPQ8N103 731 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 SUFUQ9UMX1 484 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 SMG5Q9UPR3 1016 aaKnown RBP11.12□□□□□ -0.63
COLCA1-203ENST00000532918 LOC102724159A0A0B4J2E5 919 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.11□□□□□ -0.63
COLCA1-203ENST00000532918 CHGBP05060 677 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 CXCL8P10145 99 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 TRPC1P48995 793 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 TMED10P49755 219 aaKnown RBP11.11□□□□□ -0.63
COLCA1-203ENST00000532918 HNRNPH2P55795 449 aaKnown RBP11.11□□□□□ -0.63
COLCA1-203ENST00000532918 PLCL1Q15111 1095 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 PWP2Q15269 919 aaKnown RBP11.11□□□□□ -0.63
COLCA1-203ENST00000532918 MFSD4BQ5TF39 518 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 TRIM65Q6PJ69 517 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 GAS2L3Q86XJ1 694 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 HES6Q96HZ4 224 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 PPP1R16AQ96I34 528 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 ABCB6Q9NP58 842 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 ARHGAP26Q9UNA1 814 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 SF3B1O75533 1304 aaKnown RBP eCLIP11.11□□□□□ -0.63
COLCA1-203ENST00000532918 FGF19O95750 216 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 ALOX15P16050 662 aaPredicted RBP11.11□□□□□ -0.63
COLCA1-203ENST00000532918 KRT4P19013 534 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 GRK4P32298 578 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 ZNF200P98182 395 aaPredicted RBP11.11□□□□□ -0.63
COLCA1-203ENST00000532918 COBLL1Q53SF7 1204 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 MKL1Q969V6 931 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 NAF1Q96HR8 494 aaKnown RBP11.11□□□□□ -0.63
COLCA1-203ENST00000532918 OLFM3Q96PB7 478 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 NLNQ9BYT8 704 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 CDV3Q9UKY7 258 aaKnown RBP11.11□□□□□ -0.63
COLCA1-203ENST00000532918 RWDD3Q9Y3V2 267 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 FAM32AQ9Y421 112 aaKnown RBP11.11□□□□□ -0.63
COLCA1-203ENST00000532918 SNCAIPQ9Y6H5 919 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 NDUFS2O75306 463 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 MYL2P10916 166 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 HIRAP54198 1017 aaPredicted RBP11.11□□□□□ -0.63
COLCA1-203ENST00000532918 CNTN2Q02246 1040 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 BLOC1S5Q8TDH9 187 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 ANKS1AQ92625 1134 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 GRAMD1AQ96CP6 724 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 ABHD8Q96I13 439 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 TASP1Q9H6P5 420 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 WDR41Q9HAD4 459 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 WWOXQ9NZC7 414 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 ZFP69BQ9UJL9 534 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 AK9Q5TCS8 1911 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 TLL1O43897 1013 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 HAUS5O94927 633 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 KITP10721 976 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 DGKZQ13574 1117 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 FLOT2Q14254 428 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 GRAMD1BQ3KR37 738 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 CXCL17Q6UXB2 119 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 ANKMY2Q8IV38 441 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 CAPNS2Q96L46 248 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 NR1H4Q96RI1 486 aaPredicted RBP11.11□□□□□ -0.63
COLCA1-203ENST00000532918 WWP1Q9H0M0 922 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 SPG21Q9NZD8 308 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 C6orf203Q9P0P8 240 aaPredicted RBP11.11□□□□□ -0.63
COLCA1-203ENST00000532918 NEU2Q9Y3R4 380 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 DYRK1BQ9Y463 629 aa11.11□□□□□ -0.63
COLCA1-203ENST00000532918 CCDC78A2IDD5 438 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 PMPCBO75439 489 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms