RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 PTK2Q05397 1052 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 BST2Q10589 180 aaKnown RBP15.29■□□□□ 0.04
CPSF1-206ENST00000531480 GOLGA7BQ2TAP0 167 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 SNX30Q5VWJ9 437 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 NPAS3Q8IXF0 933 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 STKLD1Q8NE28 680 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 KCTD13Q8WZ19 329 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 OVCA2Q8WZ82 227 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 DDX1Q92499 740 aaKnown RBP15.29■□□□□ 0.04
CPSF1-206ENST00000531480 BAP1Q92560 729 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 FGF13Q92913 245 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 MYADMQ96S97 322 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 XPO4Q9C0E2 1151 aaKnown RBP15.29■□□□□ 0.04
CPSF1-206ENST00000531480 IFNKQ9P0W0 207 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 ZMYM5Q9UJ78 669 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 CDH7Q9ULB5 785 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 MRPS23Q9Y3D9 190 aaKnown RBP15.29■□□□□ 0.04
CPSF1-206ENST00000531480 MUC3AQ02505 3323 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 C2CD4DB7Z1M9 353 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 MED7O43513 233 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 CALCAP01258 141 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 ZDHHC11BP0C7U3 371 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 LAMP2P13473 410 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 CEBPBP17676 345 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 GABRR2P28476 465 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 SOX5P35711 763 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 GPD2P43304 727 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 PPP3CCP48454 512 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 KIF11P52732 1056 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 PDE4CQ08493 712 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 GPRIN1Q7Z2K8 1008 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 PIGZQ86VD9 579 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 SLC47A2Q86VL8 602 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 SCML4Q8N228 414 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 PLCD3Q8N3E9 789 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 SCAMP5Q8TAC9 235 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 STK32AQ8WU08 396 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 IQCDQ96DY2 449 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 LHX5Q9H2C1 402 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 FBXO44Q9H4M3 255 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 GRPEL1Q9HAV7 217 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 NLRC4Q9NPP4 1024 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 HESX1Q9UBX0 185 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 RAPGEFL1Q9UHV5 662 aa15.28■□□□□ 0.04
CPSF1-206ENST00000531480 HELZP42694 1942 aaKnown RBP15.27■□□□□ 0.04
CPSF1-206ENST00000531480 A0A1W2PQJ5 194 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 A0A1W2PRU2 124 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 ANHXE9PGG2 379 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 TULP2O00295 520 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 AP5Z1O43299 807 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 CBFA2T2O43439 604 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 GABBR2O75899 941 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 MYL4P12829 197 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 CYP11B1P15538 503 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 PFKLP17858 780 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 DDX6P26196 483 aaKnown RBP eCLIP15.27■□□□□ 0.04
CPSF1-206ENST00000531480 YWHAQP27348 245 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 CDH5P33151 784 aaPredicted RBP15.27■□□□□ 0.04
CPSF1-206ENST00000531480 USP8P40818 1118 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 STAT1P42224 750 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 SLC8A3P57103 927 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 TAF12Q16514 161 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 PTPN21Q16825 1174 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 GET4Q7L5D6 327 aaPredicted RBP15.27■□□□□ 0.04
CPSF1-206ENST00000531480 EPS8L1Q8TE68 723 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 ACSF2Q96CM8 615 aaPredicted RBP15.27■□□□□ 0.04
CPSF1-206ENST00000531480 HSFY1Q96LI6 401 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 NUP58Q9BVL2 599 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 TRPV4Q9HBA0 871 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 CYLDQ9NQC7 956 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 NOCTQ9UK39 431 aaKnown RBP15.27■□□□□ 0.04
CPSF1-206ENST00000531480 SCML2Q9UQR0 700 aa15.27■□□□□ 0.04
CPSF1-206ENST00000531480 MYO10Q9HD67 2058 aa15.27■□□□□ 0.03
CPSF1-206ENST00000531480 KIF26AQ9ULI4 1882 aaPredicted RBP15.27■□□□□ 0.03
CPSF1-206ENST00000531480 M0QYV0 167 aa15.26■□□□□ 0.03
CPSF1-206ENST00000531480 THAP12O43422 761 aa15.26■□□□□ 0.03
CPSF1-206ENST00000531480 TPM3P06753 285 aa15.26■□□□□ 0.03
CPSF1-206ENST00000531480 CFHP08603 1231 aa15.26■□□□□ 0.03
CPSF1-206ENST00000531480 TAF10Q12962 218 aa15.26■□□□□ 0.03
CPSF1-206ENST00000531480 TEAD2Q15562 447 aa15.26■□□□□ 0.03
CPSF1-206ENST00000531480 PM20D1Q6GTS8 502 aa15.26■□□□□ 0.03
CPSF1-206ENST00000531480 PMF1Q6P1K2 205 aa15.26■□□□□ 0.03
CPSF1-206ENST00000531480 CCDC186Q7Z3E2 898 aa15.26■□□□□ 0.03
CPSF1-206ENST00000531480 ZNF677Q86XU0 584 aa15.26■□□□□ 0.03
CPSF1-206ENST00000531480 FMNL3Q8IVF7 1028 aa15.26■□□□□ 0.03
CPSF1-206ENST00000531480 ZNF276Q8N554 614 aa15.26■□□□□ 0.03
CPSF1-206ENST00000531480 TDRD5Q8NAT2 981 aaKnown RBP15.26■□□□□ 0.03
CPSF1-206ENST00000531480 PDZD8Q8NEN9 1154 aa15.26■□□□□ 0.03
CPSF1-206ENST00000531480 SECISBP2LQ93073 1101 aaKnown RBP15.26■□□□□ 0.03
CPSF1-206ENST00000531480 PCMTD1Q96MG8 357 aaPredicted RBP15.26■□□□□ 0.03
CPSF1-206ENST00000531480 SPAG5Q96R06 1193 aa15.26■□□□□ 0.03
CPSF1-206ENST00000531480 TASP1Q9H6P5 420 aa15.26■□□□□ 0.03
CPSF1-206ENST00000531480 MAGED2Q9UNF1 606 aaPredicted RBP15.26■□□□□ 0.03
CPSF1-206ENST00000531480 ZNF840PA6NDX5 716 aa15.25■□□□□ 0.03
CPSF1-206ENST00000531480 OLFM2O95897 454 aa15.25■□□□□ 0.03
CPSF1-206ENST00000531480 GJA1P17302 382 aa15.25■□□□□ 0.03
CPSF1-206ENST00000531480 TUBP50607 506 aa15.25■□□□□ 0.03
CPSF1-206ENST00000531480 STXBP5Q5T5C0 1151 aa15.25■□□□□ 0.03
CPSF1-206ENST00000531480 DENND1BQ6P3S1 775 aa15.25■□□□□ 0.03
CPSF1-206ENST00000531480 BHLHA9Q7RTU4 235 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms