RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 DDX42Q86XP3 938 aaKnown RBP eCLIP16.84■□□□□ 0.29
CHMP4A-204ENST00000530996 FBXO32Q969P5 355 aa16.84■□□□□ 0.29
CHMP4A-204ENST00000530996 C8orf48Q96LL4 319 aa16.84■□□□□ 0.29
CHMP4A-204ENST00000530996 MED10Q9BTT4 135 aa16.84■□□□□ 0.29
CHMP4A-204ENST00000530996 TTLL2Q9BWV7 592 aa16.84■□□□□ 0.29
CHMP4A-204ENST00000530996 K7ELQ4 463 aaPredicted RBP16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 CLDN5O00501 218 aa16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 TACC1O75410 805 aa16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 ALDH1A2O94788 518 aa16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 KLF8O95600 359 aaPredicted RBP16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 APODP05090 189 aa16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 ADH5P11766 374 aa16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 PTPN1P18031 435 aaKnown RBP16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 HOXD13P35453 343 aa16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 DHPSP49366 369 aaPredicted RBP16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 CACNA2D1P54289 1103 aa16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 MYL6P60660 151 aa16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 SLC7A9P82251 487 aa16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 CACNA1BQ00975 2339 aa16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 ZNF699Q32M78 642 aa16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 N4BP2L1Q5TBK1 243 aaPredicted RBP16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 PSAPL1Q6NUJ1 521 aa16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 B3GALNT2Q8NCR0 500 aa16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 SYAP1Q96A49 352 aaPredicted RBP16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 SPACA7Q96KW9 195 aa16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 NACA2Q9H009 215 aa16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 BLZF1Q9H2G9 400 aa16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 SMYD3Q9H7B4 428 aa16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 TFIP11Q9UBB9 837 aaKnown RBP16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 MMP17Q9ULZ9 603 aa16.83■□□□□ 0.28
CHMP4A-204ENST00000530996 BCLAF3A2AJT9 711 aaKnown RBP16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 K7EQS6 105 aa16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 EXOC3O60645 756 aa16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 CUTAO60888 179 aa16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 PPP6R2O75170 966 aa16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 OAS1P00973 400 aaKnown RBP16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 TIE1P35590 1138 aa16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 NOVA1P51513 510 aaKnown RBP16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 ZXDBP98169 803 aa16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 DHCR24Q15392 516 aa16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 PMS2CLQ68D20 193 aa16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 UNC13DQ70J99 1090 aa16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 EPM2AIP1Q7L775 607 aaPredicted RBP16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 ALLCQ8N6M5 410 aa16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 PDZD8Q8NEN9 1154 aa16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 MDGA1Q8NFP4 955 aa16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 CNOT6LQ96LI5 555 aaKnown RBP16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 MAGEF1Q9HAY2 307 aa16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 SLC39A2Q9NP94 309 aa16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 ARHGEF4Q9NR80 690 aa16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 ZNF638Q14966 1978 aaKnown RBP16.82■□□□□ 0.28
CHMP4A-204ENST00000530996 C4orf47A7E2U8 309 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 TGFB1I1O43294 461 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 RTN3O95197 1032 aaPredicted RBP16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 KCNK5O95279 499 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 YEATS4O95619 227 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 CST3P01034 146 aaPredicted RBP16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 IRF1P10914 325 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 BCKDHBP21953 392 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 YWHAQP27348 245 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 CASP1P29466 404 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 DAB2IPQ5VWQ8 1189 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 SHC4Q6S5L8 630 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 FAM35AQ86V20 835 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 TXNDC5Q8NBS9 432 aaKnown RBP16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 ZNF507Q8TCN5 953 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 WHAMMQ8TF30 809 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 SCFD1Q8WVM8 642 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 PNKPQ96T60 521 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 B3GNT5Q9BYG0 378 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 RNF38Q9H0F5 515 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 KRT82Q9NSB4 513 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 FAM13BQ9NYF5 915 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 SH3BP1Q9Y3L3 701 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 NME7Q9Y5B8 376 aa16.81■□□□□ 0.28
CHMP4A-204ENST00000530996 DENND4CQ5VZ89 1909 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 LNP1A1A4G5 178 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 ANTXRLA6NF34 631 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 KHNYNO15037 678 aaKnown RBP16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 POLR2DO15514 142 aaKnown RBP16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 MAP3K13O43283 966 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 KAT7O95251 611 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 OLFM2O95897 454 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 HSP90AA1P07900 732 aaKnown RBP16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 PMLP29590 882 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 ATICP31939 592 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 AFMP43652 599 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 SLC6A11P48066 632 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 ME1P48163 572 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 CASP4P49662 377 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 SLC5A3P53794 718 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 SNRPFP62306 86 aaKnown RBP16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 MRPS21P82921 87 aaKnown RBP16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 CRY1Q16526 586 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 ZNF667Q5HYK9 610 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 BTBD8Q5XKL5 378 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 ARMCX6Q7L4S7 300 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 C12orf40Q86WS4 652 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 SFTPA1Q8IWL2 248 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms