RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 ZNF605Q86T29 641 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 PRR18Q8N4B5 295 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 FATE1Q969F0 183 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 TOP1MTQ969P6 601 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 CTAGE1Q96RT6 745 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 YME1L1Q96TA2 773 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 MAP3K14Q99558 947 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 ACO2Q99798 780 aaKnown RBP7.92□□□□□ -1.14
SVIP-204ENST00000530199 SYT3Q9BQG1 590 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 SH2D4AQ9H788 454 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 MAN1C1Q9NR34 630 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 HMG20BQ9P0W2 317 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 RIPK3Q9Y572 518 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 CTNNB1P35222 781 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 GLRBP48167 497 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 CPT1AP50416 773 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 SRSF3P84103 164 aaKnown RBP7.91□□□□□ -1.14
SVIP-204ENST00000530199 TARBP2Q15633 366 aaKnown RBP7.91□□□□□ -1.14
SVIP-204ENST00000530199 PHF19Q5T6S3 580 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 SNRNP48Q6IEG0 339 aaKnown RBP7.91□□□□□ -1.14
SVIP-204ENST00000530199 TAPT1Q6NXT6 567 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 GAREM2Q75VX8 874 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 CHST15Q7LFX5 561 aaPredicted RBP7.91□□□□□ -1.14
SVIP-204ENST00000530199 SESTD1Q86VW0 696 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 SIAH1Q8IUQ4 282 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 LURAP1LQ8IV03 231 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 GRAMD1CQ8IYS0 662 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 MYOCDQ8IZQ8 938 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 PJA1Q8NG27 643 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 SVIPQ8NHG7 77 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 TTC17Q96AE7 1141 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 MVB12AQ96EY5 273 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 HIST1H2AHQ96KK5 128 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 HIST1H2AJQ99878 128 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 TACO1Q9BSH4 297 aaKnown RBP7.91□□□□□ -1.14
SVIP-204ENST00000530199 FBXO28Q9NVF7 368 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 RAI14Q9P0K7 980 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 FBXO40Q9UH90 709 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 BARX2Q9UMQ3 279 aaPredicted RBP7.91□□□□□ -1.14
SVIP-204ENST00000530199 LOC400499M0QZD8 3231 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 WDFY3Q8IZQ1 3526 aa7.91□□□□□ -1.14
SVIP-204ENST00000530199 NBEAQ8NFP9 2946 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 FSD2A1L4K1 749 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 ASB14A6NK59 587 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 TAF4O00268 1085 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 BIN1O00499 593 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 SLC30A4O14863 429 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 CUTAO60888 179 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 CKBP12277 381 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 ATF2P15336 505 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 TGM1P22735 817 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 EDNRBP24530 442 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 CD83Q01151 205 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 GABPAQ06546 454 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 MVPQ14764 893 aaKnown RBP7.9□□□□□ -1.14
SVIP-204ENST00000530199 PTGISQ16647 500 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 DUSP28Q4G0W2 176 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 BTNL9Q6UXG8 535 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 TMEM179Q6ZVK1 233 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 CXXC5Q7LFL8 322 aaKnown RBP7.9□□□□□ -1.14
SVIP-204ENST00000530199 B3GNT8Q7Z7M8 397 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 SPICE1Q8N0Z3 855 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 ANKRD35Q8N283 1001 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 SAMD3Q8N6K7 520 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 FAM133AQ8N9E0 248 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 SPATA5Q8NB90 893 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 ZBTB34Q8NCN2 500 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 OR5AN1Q8NGI8 311 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 SMARCC2Q8TAQ2 1214 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 ATP8B4Q8TF62 1192 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 HAPLN2Q9GZV7 340 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 PCDH18Q9HCL0 1135 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 SCOCQ9UIL1 159 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 ZFP69BQ9UJL9 534 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 LIMCH1Q9UPQ0 1083 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 DNM3Q9UQ16 869 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 NR2E1Q9Y466 385 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 PCDHA5Q9Y5H7 936 aa7.9□□□□□ -1.14
SVIP-204ENST00000530199 OAS3Q9Y6K5 1087 aaKnown RBP7.9□□□□□ -1.14
SVIP-204ENST00000530199 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.89□□□□□ -1.15
SVIP-204ENST00000530199 HTRA2O43464 458 aaPredicted RBP7.89□□□□□ -1.15
SVIP-204ENST00000530199 NRP2O60462 931 aa7.89□□□□□ -1.15
SVIP-204ENST00000530199 DTNBO60941 627 aa7.89□□□□□ -1.15
SVIP-204ENST00000530199 SP9P0CG40 484 aa7.89□□□□□ -1.15
SVIP-204ENST00000530199 ARP10275 920 aa7.89□□□□□ -1.15
SVIP-204ENST00000530199 IL15P40933 162 aaPredicted RBP7.89□□□□□ -1.15
SVIP-204ENST00000530199 WASP42768 502 aa7.89□□□□□ -1.15
SVIP-204ENST00000530199 NCKAP1LP55160 1127 aa7.89□□□□□ -1.15
SVIP-204ENST00000530199 ITGA1P56199 1179 aa7.89□□□□□ -1.15
SVIP-204ENST00000530199 ADAM9Q13443 819 aa7.89□□□□□ -1.15
SVIP-204ENST00000530199 MUM1L1Q5H9M0 696 aa7.89□□□□□ -1.15
SVIP-204ENST00000530199 TMEM63BQ5T3F8 832 aa7.89□□□□□ -1.15
SVIP-204ENST00000530199 NAA16Q6N069 864 aaPredicted RBP7.89□□□□□ -1.15
SVIP-204ENST00000530199 ADGRD2Q7Z7M1 963 aa7.89□□□□□ -1.15
SVIP-204ENST00000530199 ADGRA1Q86SQ6 560 aa7.89□□□□□ -1.15
SVIP-204ENST00000530199 STPG3Q8N7X2 389 aa7.89□□□□□ -1.15
SVIP-204ENST00000530199 CHST13Q8NET6 341 aa7.89□□□□□ -1.15
SVIP-204ENST00000530199 DBF4BQ8NFT6 615 aa7.89□□□□□ -1.15
SVIP-204ENST00000530199 NRG4Q8WWG1 115 aa7.89□□□□□ -1.15
SVIP-204ENST00000530199 P2RX5Q93086 422 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms