RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, human

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTR9-205	ENST00000529898	CDHR1	Q96JP9	859 aa		4.37	□□□□□ -1.71
CTR9-205	ENST00000529898	BBC3	Q96PG8	261 aa	Predicted RBP	4.37	□□□□□ -1.71
CTR9-205	ENST00000529898	SLC39A3	Q9BRY0	314 aa		4.37	□□□□□ -1.71
CTR9-205	ENST00000529898	TCHP	Q9BT92	498 aa		4.37	□□□□□ -1.71
CTR9-205	ENST00000529898	MRPL46	Q9H2W6	279 aa	Known RBP	4.37	□□□□□ -1.71
CTR9-205	ENST00000529898	LANCL2	Q9NS86	450 aa		4.37	□□□□□ -1.71
CTR9-205	ENST00000529898	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.37	□□□□□ -1.71
CTR9-205	ENST00000529898	DCAF16	Q9NXF7	216 aa		4.37	□□□□□ -1.71
CTR9-205	ENST00000529898	KLHL42	Q9P2K6	505 aa		4.37	□□□□□ -1.71
CTR9-205	ENST00000529898	SEL1L	Q9UBV2	794 aa		4.37	□□□□□ -1.71
CTR9-205	ENST00000529898	CIDEB	Q9UHD4	219 aa		4.37	□□□□□ -1.71
CTR9-205	ENST00000529898	SLC23A1	Q9UHI7	598 aa		4.37	□□□□□ -1.71
CTR9-205	ENST00000529898	XPO7	Q9UIA9	1087 aa	Known RBP	4.37	□□□□□ -1.71
CTR9-205	ENST00000529898	LCMT1	Q9UIC8	334 aa		4.37	□□□□□ -1.71
CTR9-205	ENST00000529898	KAT6B	Q8WYB5	2073 aa		4.37	□□□□□ -1.71
CTR9-205	ENST00000529898	KIF15	Q9NS87	1388 aa		4.37	□□□□□ -1.71
CTR9-205	ENST00000529898	PPIP5K1	Q6PFW1	1433 aa		4.37	□□□□□ -1.71
CTR9-205	ENST00000529898	SCAF11	Q99590	1463 aa	Known RBP	4.37	□□□□□ -1.71
CTR9-205	ENST00000529898	NLRP1	Q9C000	1473 aa		4.37	□□□□□ -1.71
CTR9-205	ENST00000529898	MADD	Q8WXG6	1647 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898		A0A1B0GTW7	788 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	ERICH2	A1L162	156 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	TMEM221	A6NGB7	291 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	TEX33	O43247	280 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	PARN	O95453	639 aa	Known RBP	4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	NUDT3	O95989	172 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	POMC	P01189	267 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	PENK	P01210	267 aa	Predicted RBP	4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	TROVE2	P10155	538 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	GSPT1	P15170	499 aa	Known RBP	4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	EZR	P15311	586 aa	Known RBP	4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	CD53	P19397	219 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	PSMA3	P25788	255 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	SMARCA1	P28370	1054 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	SLC8A1	P32418	973 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	S100A5	P33763	92 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	PIK3CA	P42336	1068 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	PAPOLA	P51003	745 aa	Known RBP	4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	TUBA4A	P68366	448 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	IGBP1	P78318	339 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	CTAG1A	P78358	180 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	PHEX	P78562	749 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	TMPRSS15	P98073	1019 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	POU5F1B	Q06416	359 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	BIRC3	Q13489	604 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	PLCB4	Q15147	1175 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	RCN1	Q15293	331 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	INA	Q16352	499 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	INAVA	Q3KP66	663 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898		Q4G0T1	1027 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	COBLL1	Q53SF7	1204 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	SH2D4B	Q5SQS7	431 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	EMC10	Q5UCC4	262 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	NXN	Q6DKJ4	435 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	SLC30A9	Q6PML9	568 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	MED25	Q71SY5	747 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	IQCA1	Q86XH1	822 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	TTC39C	Q8N584	583 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	PRPF38A	Q8NAV1	312 aa	Known RBP	4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	FAM98A	Q8NCA5	519 aa	Known RBP	4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	CUL5	Q93034	780 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	SLC35B4	Q969S0	331 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	RUNDC1	Q96C34	613 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	VMP1	Q96GC9	406 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	ZNF764	Q96H86	408 aa	Predicted RBP	4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	RBM41	Q96IZ5	413 aa	Known RBP	4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	TRIM4	Q9C037	500 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	TAOK3	Q9H2K8	898 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	PRDM13	Q9H4Q3	707 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	RIOX1	Q9H6W3	641 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	ATP6V0A4	Q9HBG4	840 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	DMRT3	Q9NQL9	472 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	DNAJC28	Q9NX36	388 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	TBC1D7	Q9P0N9	293 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	ZNHIT2	Q9UHR6	403 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	CFAP45	Q9UL16	551 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	PAIP2B	Q9ULR5	123 aa	Known RBP	4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	ZNF148	Q9UQR1	794 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	MAP3K2	Q9Y2U5	619 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	COX11	Q9Y6N1	276 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	PARD3	Q8TEW0	1356 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	PRG4	Q92954	1404 aa	Predicted RBP	4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	GRIN2A	Q12879	1464 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	PLEKHH2	Q8IVE3	1493 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	PLXNC1	O60486	1568 aa		4.36	□□□□□ -1.71
CTR9-205	ENST00000529898	ZC3H13	Q5T200	1668 aa	Known RBP	4.35	□□□□□ -1.71
CTR9-205	ENST00000529898	COL11A2	P13942	1736 aa	Predicted RBP	4.35	□□□□□ -1.71
CTR9-205	ENST00000529898	IFT172	Q9UG01	1749 aa		4.35	□□□□□ -1.71
CTR9-205	ENST00000529898	FAM171A2	A8MVW0	826 aa		4.35	□□□□□ -1.71
CTR9-205	ENST00000529898	SGTA	O43765	313 aa		4.35	□□□□□ -1.71
CTR9-205	ENST00000529898	DIAPH2	O60879	1101 aa		4.35	□□□□□ -1.71
CTR9-205	ENST00000529898	MBD3	O95983	291 aa		4.35	□□□□□ -1.71
CTR9-205	ENST00000529898	FOS	P01100	380 aa	Predicted RBP	4.35	□□□□□ -1.71
CTR9-205	ENST00000529898	AMY1A	P04745	511 aa		4.35	□□□□□ -1.71
CTR9-205	ENST00000529898	PYGL	P06737	847 aa		4.35	□□□□□ -1.71
CTR9-205	ENST00000529898	ATP5J	P18859	108 aa		4.35	□□□□□ -1.71
CTR9-205	ENST00000529898	AGXT	P21549	392 aa		4.35	□□□□□ -1.71
CTR9-205	ENST00000529898	PCSK1	P29120	753 aa		4.35	□□□□□ -1.71
CTR9-205	ENST00000529898	TCF7	P36402	384 aa	Predicted RBP	4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms