RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 PNPLA8Q9NP80 782 aa13.41□□□□□ -0.26
CCDC90B-216ENST00000529856 UBE2TQ9NPD8 197 aaPredicted RBP13.41□□□□□ -0.26
CCDC90B-216ENST00000529856 FBXL21Q9UKT6 434 aa13.41□□□□□ -0.26
CCDC90B-216ENST00000529856 CNTN6Q9UQ52 1028 aa13.41□□□□□ -0.26
CCDC90B-216ENST00000529856 NUP210Q8TEM1 1887 aaPredicted RBP13.41□□□□□ -0.26
CCDC90B-216ENST00000529856 FAM92AA1XBS5 289 aa13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 C2orf78A6NCI8 922 aa13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 DPYSL4O14531 572 aa13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 LETM1O95202 739 aaPredicted RBP13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 PFKLP17858 780 aa13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 MFAP3P55082 362 aa13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 PFKPQ01813 784 aa13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 MYL5Q02045 173 aa13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 IFRD2Q12894 506 aaPredicted RBP13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 SGO2Q562F6 1265 aa13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 CELF5Q8N6W0 485 aaKnown RBP13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 USP13Q92995 863 aaPredicted RBP13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 FBXO32Q969P5 355 aa13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 SLC22A12Q96S37 553 aa13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 CYP2S1Q96SQ9 504 aa13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 UBXN6Q9BZV1 441 aa13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 SMG9Q9H0W8 520 aaKnown RBP13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 FBXO44Q9H4M3 255 aa13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 TRPC7Q9HCX4 862 aa13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 TDP1Q9NUW8 608 aa13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 CHORDC1Q9UHD1 332 aaPredicted RBP13.4□□□□□ -0.26
CCDC90B-216ENST00000529856 TRAV19A0A0A6YYK7 116 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 KRBA1A5PL33 1030 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 PDGFBP01127 241 aaPredicted RBP13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 USP17L7P0C7H9 530 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 ZDHHC11BP0C7U3 371 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 CD19P15391 556 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 HDCP19113 662 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 GDI1P31150 447 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 ZNF132P52740 706 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 APBA1Q02410 837 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 FCHO2Q0JRZ9 810 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 ZNF268Q14587 947 aaPredicted RBP13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 NCAPHQ15003 741 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 KRT31Q15323 416 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 GOLGA7BQ2TAP0 167 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 ANO6Q4KMQ2 910 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 SLC44A4Q53GD3 710 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 IER5LQ5T953 404 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 SNX30Q5VWJ9 437 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 DPY19L2P1Q6NXN4 242 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 GJB7Q6PEY0 223 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 GPRIN1Q7Z2K8 1008 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 SIX5Q8N196 739 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 FBXL6Q8N531 539 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 ARL14EPQ8N8R7 260 aaPredicted RBP13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 RBBP8NLQ8NC74 664 aaPredicted RBP13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 PDZD8Q8NEN9 1154 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 BPIFB1Q8TDL5 484 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 TFAP2BQ92481 460 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 IRF7Q92985 503 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 BPIFA3Q9BQP9 254 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 FUCA2Q9BTY2 467 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 NAT10Q9H0A0 1025 aaKnown RBP13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 BRD9Q9H8M2 597 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 SIX2Q9NPC8 291 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 TRPV5Q9NQA5 729 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 TAB2Q9NYJ8 693 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 APEX2Q9UBZ4 518 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 CA14Q9ULX7 337 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 CCL26Q9Y258 94 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 PATJQ8NI35 1801 aa13.39□□□□□ -0.27
CCDC90B-216ENST00000529856 LRRC10BA6NIK2 292 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 O00370 1275 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 PES1O00541 588 aaKnown RBP13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 ZNF263O14978 683 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 CHADO15335 359 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 ABL1P00519 1130 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 PDE6CP51160 858 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 KIF11P52732 1056 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 SLC8A3P57103 927 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 KCNMA1Q12791 1236 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 CNGA2Q16280 664 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 SMYD5Q6GMV2 418 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 LCLAT1Q6UWP7 414 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 TTC30AQ86WT1 665 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 YAF2Q8IY57 180 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 DNASE1L2Q92874 299 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 ZSWIM1Q9BR11 485 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 RNF38Q9H0F5 515 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 VPS16Q9H269 839 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 HSD3B7Q9H2F3 369 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 KIF9Q9HAQ2 790 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 ARHGEF3Q9NR81 526 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 GMIPQ9P107 970 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 HESX1Q9UBX0 185 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 LIMA1Q9UHB6 759 aaKnown RBP13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 TSPAN16Q9UKR8 245 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 SCML2Q9UQR0 700 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 USP3Q9Y6I4 520 aa13.38□□□□□ -0.27
CCDC90B-216ENST00000529856 ARNTLO00327 626 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 OLFM2O95897 454 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 OAS1P00973 400 aaKnown RBP13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 CALCAP01258 141 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 CKMP06732 381 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms