RNA–Protein interactions for RNA: ENST00000529843.1

BEST3-206, Transcript of bestrophin 3, human

TSL 3

Gene BEST3, Length 386 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BEST3-206	ENST00000529843	RIPOR3	Q96MK2	946 aa		4.09	□□□□□ -1.75
BEST3-206	ENST00000529843	MNT	Q99583	582 aa		4.09	□□□□□ -1.75
BEST3-206	ENST00000529843	GLIS2	Q9BZE0	524 aa	Predicted RBP	4.09	□□□□□ -1.75
BEST3-206	ENST00000529843	UNK	Q9C0B0	810 aa	Known RBP	4.09	□□□□□ -1.75
BEST3-206	ENST00000529843	TMX4	Q9H1E5	349 aa	Predicted RBP	4.09	□□□□□ -1.75
BEST3-206	ENST00000529843	GBA2	Q9HCG7	927 aa	Predicted RBP	4.09	□□□□□ -1.75
BEST3-206	ENST00000529843	VSX1	Q9NZR4	365 aa	Predicted RBP	4.09	□□□□□ -1.75
BEST3-206	ENST00000529843	SNX13	Q9Y5W8	968 aa		4.09	□□□□□ -1.75
BEST3-206	ENST00000529843	SZT2	Q5T011	3432 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	CCDC78	A2IDD5	438 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	POM121B	A6NF01	834 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	GRXCR1	A8MXD5	290 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843		M0QYG6	137 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	NCK2	O43639	380 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	GNAI2	P04899	355 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	SRGN	P10124	158 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	PIM1	P11309	404 aa	Predicted RBP	4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	COL6A3	P12111	3177 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	CKB	P12277	381 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	TNFSF4	P23510	183 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	APOBEC3A	P31941	199 aa	Predicted RBP	4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	EPS15	P42566	896 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	MKI67	P46013	3256 aa	Known RBP	4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	RPS16	P62249	146 aa	Known RBP	4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	HTRA4	P83105	476 aa	Predicted RBP	4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	NHLH2	Q02577	135 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	HHEX	Q03014	270 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	SREBF2	Q12772	1141 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	SLC13A2	Q13183	592 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	CTBP1	Q13363	440 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	OS9	Q13438	667 aa	Predicted RBP	4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	DAG1	Q14118	895 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	KIAA0100	Q14667	2235 aa	Known RBP	4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	C1orf141	Q5JVX7	400 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	C10orf62	Q5T681	223 aa	Predicted RBP	4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	PRR5L	Q6MZQ0	368 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	ZNF783	Q6ZMS7	281 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	PPP1R32	Q7Z5V6	425 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	USP37	Q86T82	979 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	DPP9	Q86TI2	863 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	KRTAP19-1	Q8IUB9	90 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	LIX1L	Q8IVB5	337 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	RHOT2	Q8IXI1	618 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	GSPT2	Q8IYD1	628 aa	Known RBP	4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	AOPEP	Q8N6M6	819 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	NUP133	Q8WUM0	1156 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	FAM122A	Q96E09	287 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	C20orf173	Q96LM9	149 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	PSMD1	Q99460	953 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	GPR87	Q9BY21	358 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	KRTAP4-8	Q9BYQ9	185 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	IMPG2	Q9BZV3	1241 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	SACM1L	Q9NTJ5	587 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	DMTF1	Q9Y222	760 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	CHST2	Q9Y4C5	530 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	RIPOR2	Q9Y4F9	1068 aa		4.08	□□□□□ -1.76
BEST3-206	ENST00000529843	TAF1	P21675	1872 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	PSME4	Q14997	1843 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	ZNF609	O15014	1411 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	XDH	P47989	1333 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843		A0A087WWL8	130 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	ABHD14A-ACY1	A0A1B0GW23	586 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	KRTAP23-1	A1A580	65 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	TMEM233	B4DJY2	109 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	ZNF185	O15231	689 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	KIF20A	O95235	890 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	IL18RAP	O95256	599 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	CHEK2	O96017	543 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	TH	P07101	528 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	GRP	P07492	148 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	FDXR	P22570	491 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	ALDH1B1	P30837	517 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	HIBADH	P31937	336 aa	Known RBP	4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	PLA2G5	P39877	138 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	STT3A	P46977	705 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	SLC11A2	P49281	568 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	MAN2A2	P49641	1150 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	FAM209B	Q5JX69	171 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	SKAP1	Q86WV1	359 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	DEPTOR	Q8TB45	409 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	EDA	Q92838	391 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	FAM89A	Q96GI7	184 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	MARS2	Q96GW9	593 aa	Known RBP	4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	LRIG1	Q96JA1	1093 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	ZC3H10	Q96K80	434 aa	Known RBP	4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	ARPC5L	Q9BPX5	153 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	HTATIP2	Q9BUP3	242 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	BDH2	Q9BUT1	245 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	GOLGA2P5	Q9HBQ8	144 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	PNPLA8	Q9NP80	782 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	STARD7	Q9NQZ5	370 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	ETAA1	Q9NY74	926 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	HSFX1	Q9UBD0	423 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	PLEKHM1	Q9Y4G2	1056 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	CEP290	O15078	2479 aa		4.07	□□□□□ -1.76
BEST3-206	ENST00000529843	COL4A5	P29400	1685 aa		4.06	□□□□□ -1.76
BEST3-206	ENST00000529843		A0A1W2PPC4	97 aa		4.06	□□□□□ -1.76
BEST3-206	ENST00000529843	GOLGA6L6	A8MZA4	724 aa		4.06	□□□□□ -1.76
BEST3-206	ENST00000529843		H0YGN5	161 aa		4.06	□□□□□ -1.76
BEST3-206	ENST00000529843	TBC1D4	O60343	1298 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms