RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 EHD3Q9NZN3 535 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 XPR1Q9UBH6 696 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 SERTAD3Q9UJW9 196 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 CDC23Q9UJX2 597 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 TMX2Q9Y320 296 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 ENTPD2Q9Y5L3 495 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 A0A087WV62 115 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 LRRC3CA6NJW4 275 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 NBNO60934 754 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 ANXA2P07355 339 aaKnown RBP5.48□□□□□ -1.53
C11orf88-204ENST00000529661 HARSP12081 509 aaKnown RBP5.48□□□□□ -1.53
C11orf88-204ENST00000529661 FGFR2P21802 821 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 TECP42680 631 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 HSPA7P48741 367 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 SLC11A2P49281 568 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 UCP3P55916 312 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 LOXL3P58215 753 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 RAB32Q13637 225 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 PMS2P11Q13670 270 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 FAM153CQ494X1 144 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 SLC44A4Q53GD3 710 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 ARHGAP40Q5TG30 622 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 ANO1Q5XXA6 986 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 CATSPERGQ6ZRH7 1159 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 AMIGO2Q86SJ2 522 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 RASAL3Q86YV0 1011 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 SYTL1Q8IYJ3 562 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 FAM109AQ8N4B1 249 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 SLC15A4Q8N697 577 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 DNAJC5GQ8N7S2 189 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 ANKRD42Q8N9B4 389 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 ZNF384Q8TF68 577 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 RFKQ969G6 155 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 SNX22Q96L94 193 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 MOGAT1Q96PD6 335 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 TTLL2Q9BWV7 592 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 CHST8Q9H2A9 424 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 GJB4Q9NTQ9 266 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 PCDHGB2Q9Y5G2 931 aa5.48□□□□□ -1.53
C11orf88-204ENST00000529661 CLCA1A8K7I4 914 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 PYCARD-AS1I3L0S3 204 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 C1QL1O75973 258 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 C1RP00736 705 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 FGAP02671 866 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 GPD1P21695 349 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 EEF1GP26641 437 aaKnown RBP5.47□□□□□ -1.53
C11orf88-204ENST00000529661 CD38P28907 300 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 VIPR2P41587 438 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 MRPS21P82921 87 aaKnown RBP5.47□□□□□ -1.53
C11orf88-204ENST00000529661 SATB1Q01826 763 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 RAPGEF1Q13905 1077 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 TRIM14Q14142 442 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 MPEG1Q2M385 716 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 SLC35G1Q2M3R5 365 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 PLAC9Q5JTB6 97 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 ICE2Q659A1 982 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 RGS7BPQ6MZT1 257 aaPredicted RBP5.47□□□□□ -1.53
C11orf88-204ENST00000529661 PGBD2Q6P3X8 592 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 UNC13DQ70J99 1090 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 BEND5Q7L4P6 421 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 VGLL2Q8N8G2 317 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 MYRIPQ8NFW9 859 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 OR56A3Q8NH54 315 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 NTN5Q8WTR8 489 aaPredicted RBP5.47□□□□□ -1.53
C11orf88-204ENST00000529661 ATRIPQ8WXE1 791 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 EVI5LQ96CN4 794 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 IQCDQ96DY2 449 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 NELL2Q99435 816 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 PTDSS2Q9BVG9 487 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 SHOC2Q9UQ13 582 aa5.47□□□□□ -1.53
C11orf88-204ENST00000529661 CCDC189A1A4V9 331 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 MBD3L4A6NDZ8 208 aaPredicted RBP5.46□□□□□ -1.54
C11orf88-204ENST00000529661 MBD3L3A6NE82 208 aaPredicted RBP5.46□□□□□ -1.54
C11orf88-204ENST00000529661 hCG_1984214I3L0E3 225 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 HNRNPDLO14979 420 aaKnown RBP5.46□□□□□ -1.54
C11orf88-204ENST00000529661 FFAR2O15552 330 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 THAP12O43422 761 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 NXPH3O95157 252 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 IL1R1P14778 569 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 CLCN2P51788 898 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 BMPR2Q13873 1038 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 PDCD2Q16342 344 aaPredicted RBP5.46□□□□□ -1.54
C11orf88-204ENST00000529661 HSP90AB4PQ58FF6 505 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 ZNF618Q5T7W0 954 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 TEDDM1Q5T9Z0 273 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 SFRP4Q6FHJ7 346 aaPredicted RBP5.46□□□□□ -1.54
C11orf88-204ENST00000529661 SYCE2Q6PIF2 218 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 CCDC174Q6PII3 467 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 RNF44Q7L0R7 432 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 MAVSQ7Z434 540 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 MPP5Q8N3R9 675 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 PPM1EQ8WY54 764 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 ZNF566Q969W8 418 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 TIMP4Q99727 224 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.46□□□□□ -1.54
C11orf88-204ENST00000529661 XPNPEP3Q9NQH7 507 aa5.46□□□□□ -1.54
C11orf88-204ENST00000529661 ARPP21Q9UBL0 812 aaPredicted RBP5.46□□□□□ -1.54
C11orf88-204ENST00000529661 MRPS17Q9Y2R5 130 aaKnown RBP5.46□□□□□ -1.54
C11orf88-204ENST00000529661 MORC2Q9Y6X9 1032 aaPredicted RBP5.46□□□□□ -1.54
C11orf88-204ENST00000529661 hCG_1642624A0A1W2PR95 340 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms