RNA–Protein interactions for RNA: ENST00000529430.1

CLP1-203, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 5 BASIC

Gene CLP1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-203ENST00000529430 PURAQ00577 322 aaKnown RBP12.38□□□□□ -0.43
CLP1-203ENST00000529430 PLCB3Q01970 1234 aa12.38□□□□□ -0.43
CLP1-203ENST00000529430 LONRF1Q17RB8 773 aa12.38□□□□□ -0.43
CLP1-203ENST00000529430 LCLAT1Q6UWP7 414 aa12.38□□□□□ -0.43
CLP1-203ENST00000529430 EXOC3L1Q86VI1 746 aa12.38□□□□□ -0.43
CLP1-203ENST00000529430 PCSK9Q8NBP7 692 aaKnown RBP12.38□□□□□ -0.43
CLP1-203ENST00000529430 SLC35B2Q8TB61 432 aa12.38□□□□□ -0.43
CLP1-203ENST00000529430 ATXN2LQ8WWM7 1075 aaKnown RBP12.38□□□□□ -0.43
CLP1-203ENST00000529430 KIF12Q96FN5 646 aa12.38□□□□□ -0.43
CLP1-203ENST00000529430 RBM15Q96T37 977 aaKnown RBP eCLIP12.38□□□□□ -0.43
CLP1-203ENST00000529430 NT5C1AQ9BXI3 368 aa12.38□□□□□ -0.43
CLP1-203ENST00000529430 GCOM2Q9BZD3 368 aaPredicted RBP12.38□□□□□ -0.43
CLP1-203ENST00000529430 DNAI2Q9GZS0 605 aa12.38□□□□□ -0.43
CLP1-203ENST00000529430 UPF3AQ9H1J1 476 aaKnown RBP12.38□□□□□ -0.43
CLP1-203ENST00000529430 ADAM7Q9H2U9 754 aa12.38□□□□□ -0.43
CLP1-203ENST00000529430 METTL5Q9NRN9 209 aaKnown RBP12.38□□□□□ -0.43
CLP1-203ENST00000529430 CYTH4Q9UIA0 394 aa12.38□□□□□ -0.43
CLP1-203ENST00000529430 SHOC2Q9UQ13 582 aa12.38□□□□□ -0.43
CLP1-203ENST00000529430 C3orf70A6NLC5 250 aaPredicted RBP12.37□□□□□ -0.43
CLP1-203ENST00000529430 MGRN1O60291 552 aa12.37□□□□□ -0.43
CLP1-203ENST00000529430 PGK1P00558 417 aa12.37□□□□□ -0.43
CLP1-203ENST00000529430 SETSIPP0DME0 302 aa12.37□□□□□ -0.43
CLP1-203ENST00000529430 YARSP54577 528 aaKnown RBP12.37□□□□□ -0.43
CLP1-203ENST00000529430 TRIM32Q13049 653 aa12.37□□□□□ -0.43
CLP1-203ENST00000529430 GPS1Q13098 491 aa12.37□□□□□ -0.43
CLP1-203ENST00000529430 CENPUQ71F23 418 aa12.37□□□□□ -0.43
CLP1-203ENST00000529430 RNF180Q86T96 592 aa12.37□□□□□ -0.43
CLP1-203ENST00000529430 KIAA0319LQ8IZA0 1049 aa12.37□□□□□ -0.43
CLP1-203ENST00000529430 KCTD6Q8NC69 237 aa12.37□□□□□ -0.43
CLP1-203ENST00000529430 CMASQ8NFW8 434 aaPredicted RBP12.37□□□□□ -0.43
CLP1-203ENST00000529430 TWNKQ96RR1 684 aa12.37□□□□□ -0.43
CLP1-203ENST00000529430 FAM118BQ9BPY3 351 aa12.37□□□□□ -0.43
CLP1-203ENST00000529430 ZWILCHQ9H900 591 aa12.37□□□□□ -0.43
CLP1-203ENST00000529430 CASP8AP2Q9UKL3 1982 aa12.37□□□□□ -0.43
CLP1-203ENST00000529430 SMIM35A0A1B0GVV1 85 aa12.36□□□□□ -0.43
CLP1-203ENST00000529430 SGK1O00141 431 aa12.36□□□□□ -0.43
CLP1-203ENST00000529430 HAS3O00219 553 aa12.36□□□□□ -0.43
CLP1-203ENST00000529430 CSDE1O75534 798 aaKnown RBP12.36□□□□□ -0.43
CLP1-203ENST00000529430 TRUB2O95900 331 aaKnown RBP12.36□□□□□ -0.43
CLP1-203ENST00000529430 CYP2C9P11712 490 aa12.36□□□□□ -0.43
CLP1-203ENST00000529430 GPD1P21695 349 aa12.36□□□□□ -0.43
CLP1-203ENST00000529430 CCND3P30281 292 aaPredicted RBP12.36□□□□□ -0.43
CLP1-203ENST00000529430 ZNF143P52747 638 aaPredicted RBP12.36□□□□□ -0.43
CLP1-203ENST00000529430 NDST1P52848 882 aa12.36□□□□□ -0.43
CLP1-203ENST00000529430 MARCH8Q5T0T0 291 aa12.36□□□□□ -0.43
CLP1-203ENST00000529430 UBAP2Q5T6F2 1119 aaKnown RBP12.36□□□□□ -0.43
CLP1-203ENST00000529430 TXNRD3NBQ6F5E7 133 aa12.36□□□□□ -0.43
CLP1-203ENST00000529430 BEST2Q8NFU1 509 aa12.36□□□□□ -0.43
CLP1-203ENST00000529430 TSPAN18Q96SJ8 248 aa12.36□□□□□ -0.43
CLP1-203ENST00000529430 PPP1R16BQ96T49 567 aa12.36□□□□□ -0.43
CLP1-203ENST00000529430 CNPY3Q9BT09 278 aa12.36□□□□□ -0.43
CLP1-203ENST00000529430 RSAD1Q9HA92 442 aa12.36□□□□□ -0.43
CLP1-203ENST00000529430 HMX1Q9NP08 348 aaPredicted RBP12.36□□□□□ -0.43
CLP1-203ENST00000529430 SAYSD1Q9NPB0 183 aa12.36□□□□□ -0.43
CLP1-203ENST00000529430 TRIM17Q9Y577 477 aa12.36□□□□□ -0.43
CLP1-203ENST00000529430 ALOX15BO15296 676 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 CST8O60676 142 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 AXLP30530 894 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 GRK4P32298 578 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 NKX3-2P78367 333 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 ELF3P78545 371 aaPredicted RBP12.35□□□□□ -0.43
CLP1-203ENST00000529430 RIPK1Q13546 671 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 FAM47CQ5HY64 1035 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 FAM102AQ5T9C2 384 aaPredicted RBP12.35□□□□□ -0.43
CLP1-203ENST00000529430 RNASEH2BQ5TBB1 312 aaKnown RBP12.35□□□□□ -0.43
CLP1-203ENST00000529430 MAP3K21Q5TCX8 1036 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 SLC27A1Q6PCB7 646 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 TDRPQ86YL5 185 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 ARFGAP1Q8N6T3 406 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 LRRC52Q8N7C0 313 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 CCDC63Q8NA47 563 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 DYDC1Q8WWB3 177 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 RSAD2Q8WXG1 361 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 MAK16Q9BXY0 300 aaKnown RBP12.35□□□□□ -0.43
CLP1-203ENST00000529430 FAM49AQ9H0Q0 323 aaPredicted RBP12.35□□□□□ -0.43
CLP1-203ENST00000529430 DNAJC17Q9NVM6 304 aaKnown RBP12.35□□□□□ -0.43
CLP1-203ENST00000529430 HMGXB4Q9UGU5 601 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 USP18Q9UMW8 372 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 SLC12A4Q9UP95 1085 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 MBLAC1A4D2B0 266 aaPredicted RBP12.35□□□□□ -0.43
CLP1-203ENST00000529430 APOC4-APOC2K7ER74 178 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 KIF1CO43896 1103 aaKnown RBP12.35□□□□□ -0.43
CLP1-203ENST00000529430 CAPN15O75808 1086 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 CABYRO75952 493 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 NPTXRO95502 500 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 APOC2P02655 101 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 INHAP05111 366 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 RPLP2P05387 115 aaKnown RBP12.35□□□□□ -0.43
CLP1-203ENST00000529430 IL1R2P27930 398 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 MIPP30301 263 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 ELF1P32519 619 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 CAP1Q01518 475 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 OTUD4Q01804 1114 aaKnown RBP12.35□□□□□ -0.43
CLP1-203ENST00000529430 TFDP2Q14188 446 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 SPRED3Q2MJR0 410 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 OR6B2Q6IFH4 312 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 TAF2Q6P1X5 1199 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 CXCL17Q6UXB2 119 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 ARHGEF18Q6ZSZ5 1173 aa12.35□□□□□ -0.43
CLP1-203ENST00000529430 CATSPER4Q7RTX7 472 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms