RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 CFAP97Q9P2B7 532 aa13.83□□□□□ -0.2
CPSF1-204ENST00000529288 CHORDC1Q9UHD1 332 aaPredicted RBP13.83□□□□□ -0.2
CPSF1-204ENST00000529288 INVSQ9Y283 1065 aa13.83□□□□□ -0.2
CPSF1-204ENST00000529288 DCHS1Q96JQ0 3298 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 ACTN4O43707 911 aaKnown RBP13.82□□□□□ -0.2
CPSF1-204ENST00000529288 KLRC4O43908 158 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 GDF9O60383 454 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 LRP3O75074 770 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 PFKFB1P16118 471 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 YWHAQP27348 245 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 PPP3CCP48454 512 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 DGKEP52429 567 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 NOP14P78316 857 aaKnown RBP13.82□□□□□ -0.2
CPSF1-204ENST00000529288 DLG4P78352 724 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 ORC1Q13415 861 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 DMC1Q14565 340 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 SF3A2Q15428 464 aaKnown RBP13.82□□□□□ -0.2
CPSF1-204ENST00000529288 C2orf27AQ580R0 203 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 NUP93Q8N1F7 819 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 C12orf50Q8NA57 414 aaPredicted RBP13.82□□□□□ -0.2
CPSF1-204ENST00000529288 KIAA0895Q8NCT3 520 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 NETO1Q8TDF5 533 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 EZH1Q92800 747 aaPredicted RBP13.82□□□□□ -0.2
CPSF1-204ENST00000529288 SPATA32Q96LK8 384 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 CEP295NLQ96MC4 621 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 KCNK16Q96T55 309 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 TTLL2Q9BWV7 592 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 XYLT2Q9H1B5 865 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 OTOGLQ3ZCN5 2332 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 ATP8B3O60423 1300 aa13.82□□□□□ -0.2
CPSF1-204ENST00000529288 DCLK1O15075 740 aa13.81□□□□□ -0.2
CPSF1-204ENST00000529288 APBB3O95704 486 aa13.81□□□□□ -0.2
CPSF1-204ENST00000529288 STAU1O95793 577 aaKnown RBP13.81□□□□□ -0.2
CPSF1-204ENST00000529288 C4BPAP04003 597 aaKnown RBP13.81□□□□□ -0.2
CPSF1-204ENST00000529288 NR3C1P04150 777 aa13.81□□□□□ -0.2
CPSF1-204ENST00000529288 SLC6A11P48066 632 aa13.81□□□□□ -0.2
CPSF1-204ENST00000529288 AP3M2P53677 418 aa13.81□□□□□ -0.2
CPSF1-204ENST00000529288 SLC7A9P82251 487 aa13.81□□□□□ -0.2
CPSF1-204ENST00000529288 ACOT1Q86TX2 421 aa13.81□□□□□ -0.2
CPSF1-204ENST00000529288 CCDC33Q8N5R6 958 aa13.81□□□□□ -0.2
CPSF1-204ENST00000529288 CAMKK1Q8N5S9 505 aa13.81□□□□□ -0.2
CPSF1-204ENST00000529288 SCAMP5Q8TAC9 235 aa13.81□□□□□ -0.2
CPSF1-204ENST00000529288 PARD3BQ8TEW8 1205 aa13.81□□□□□ -0.2
CPSF1-204ENST00000529288 CCDC47Q96A33 483 aaKnown RBP13.81□□□□□ -0.2
CPSF1-204ENST00000529288 ACDQ96AP0 544 aa13.81□□□□□ -0.2
CPSF1-204ENST00000529288 TNIP3Q96KP6 325 aa13.81□□□□□ -0.2
CPSF1-204ENST00000529288 NACA2Q9H009 215 aa13.81□□□□□ -0.2
CPSF1-204ENST00000529288 SDCBP2Q9H190 292 aa13.81□□□□□ -0.2
CPSF1-204ENST00000529288 SMOC1Q9H4F8 434 aa13.81□□□□□ -0.2
CPSF1-204ENST00000529288 TMEM30AQ9NV96 361 aa13.81□□□□□ -0.2
CPSF1-204ENST00000529288 CIZ1Q9ULV3 898 aaPredicted RBP13.81□□□□□ -0.2
CPSF1-204ENST00000529288 ANTXRLA6NF34 631 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 SLC9A3R1O14745 358 aaPredicted RBP13.8□□□□□ -0.2
CPSF1-204ENST00000529288 CALUO43852 315 aaPredicted RBP13.8□□□□□ -0.2
CPSF1-204ENST00000529288 AP1G2O75843 785 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 RTN3O95197 1032 aaPredicted RBP13.8□□□□□ -0.2
CPSF1-204ENST00000529288 VNN1O95497 513 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 RPN1P04843 607 aaKnown RBP13.8□□□□□ -0.2
CPSF1-204ENST00000529288 IRF1P10914 325 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 P4HA1P13674 534 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 CCDC130P13994 396 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 TCF3P15923 654 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 PFKLP17858 780 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 GBP1P32455 592 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 OPRD1P41143 372 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 DHCR24Q15392 516 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 SPOPLQ6IQ16 392 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 SYT13Q7L8C5 426 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 FAM35AQ86V20 835 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 TSTD1Q8NFU3 115 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 TPSD1Q9BZJ3 242 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 MMRN2Q9H8L6 949 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 MAPK8IP1Q9UQF2 711 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 FRMD4BQ9Y2L6 1034 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 SH3BP1Q9Y3L3 701 aa13.8□□□□□ -0.2
CPSF1-204ENST00000529288 CCDC163A0A0D9SF12 145 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 K7EQS6 105 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 PDXKO00764 312 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 SLC30A4O14863 429 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 OAS1P00973 400 aaKnown RBP13.79□□□□□ -0.2
CPSF1-204ENST00000529288 CYP17A1P05093 508 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 CMA1P23946 247 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 PIK3CAP42336 1068 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 SYKP43405 635 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 NDST1P52848 882 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 SLC5A3P53794 718 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 MAP3K7CLP57077 242 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 KRT85P78386 507 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 KDSRQ06136 332 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 SGSM1Q2NKQ1 1148 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 PPM1JQ5JR12 505 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 HECTD3Q5T447 861 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 IL31Q6EBC2 164 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 ADGRG2Q8IZP9 1017 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 PDZD8Q8NEN9 1154 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 CCDC26Q8TAB7 109 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 JAKMIP2Q96AA8 810 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 KCTD10Q9H3F6 313 aa13.79□□□□□ -0.2
CPSF1-204ENST00000529288 DMAP1Q9NPF5 467 aaPredicted RBP13.79□□□□□ -0.2
CPSF1-204ENST00000529288 KRT82Q9NSB4 513 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms